Reference Position Consensus Position Variation Type Length Reference Variants Allele Variations Frequencies Counts Coverage Variant #1 Frequency of #1 Count of #1 Variant #2 Frequency of #2 Count of #2 Overlapping Annotations Amino Acid Change ConsensusfromContig6 138 107 SNP 1 T 2 T/C 50.0/40.0 5/4 10 T 50 5 C 40 4 ConsensusfromContig91 271 267 SNP 1 T 2 C/T 50.0/50.0 5/5 10 C 50 5 T 50 5 ConsensusfromContig279 90 90 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig357 203 188 SNP 1 G 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig402 31 21 SNP 1 C 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig452 325 295 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig465 187 38 SNP 1 T 1 C 90 9 10 C 90 9 ConsensusfromContig481 51 24 SNP 1 G 1 A 100 10 10 A 100 10 ConsensusfromContig643 255 241 SNP 1 A 1 T 90 9 10 T 90 9 ConsensusfromContig660 118 89 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig660 121 92 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig666 66 66 SNP 1 A 2 A/T 50.0/50.0 5/5 10 A 50 5 T 50 5 ConsensusfromContig929 92 91 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig939 128 122 SNP 1 C 1 T 80 8 10 T 80 8 ConsensusfromContig943 101 48 SNP 1 T 1 C 90 9 10 C 90 9 ConsensusfromContig1082 219 205 SNP 1 C 2 G/C 60.0/40.0 6/4 10 G 60 6 C 40 4 ConsensusfromContig1162 97 50 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig1172 242 218 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig1193 26 14 SNP 1 G 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig1194 87 87 SNP 1 A 1 G 70 7 10 G 70 7 ConsensusfromContig1209 214 149 SNP 1 G 1 T 90 9 10 T 90 9 ConsensusfromContig1209 730 617 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig1307 205 190 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig1307 221 206 SNP 1 A 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig1425 94 69 SNP 1 T 1 A 70 7 10 A 70 7 ConsensusfromContig1647 42 42 SNP 1 G 1 A 100 10 10 A 100 10 ConsensusfromContig1661 59 37 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig1734 21 15 SNP 1 C 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig1750 553 455 SNP 1 T 1 C 90 9 10 C 90 9 ConsensusfromContig1759 283 245 SNP 1 G 2 T/G 60.0/40.0 6/4 10 T 60 6 G 40 4 ConsensusfromContig1852 624 496 SNP 1 T 2 T/A 60.0/40.0 6/4 10 T 60 6 A 40 4 ConsensusfromContig1863 35 27 SNP 1 G 2 G/T 60.0/40.0 6/4 10 G 60 6 T 40 4 ConsensusfromContig1880 283 19 SNP 1 T 1 C 90 9 10 C 90 9 ConsensusfromContig1976 477 447 SNP 1 T 1 C 80 8 10 C 80 8 ConsensusfromContig1990 50 50 SNP 1 T 2 A/T 50.0/50.0 5/5 10 A 50 5 T 50 5 ConsensusfromContig1990 77 77 SNP 1 T 2 G/T 50.0/50.0 5/5 10 G 50 5 T 50 5 ConsensusfromContig2099 263 37 SNP 1 T 1 G 70 7 10 G 70 7 ConsensusfromContig2100 86 54 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig2101 189 153 SNP 1 A 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig2106 196 167 SNP 1 A 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig2117 149 103 SNP 1 C 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig2211 38 38 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig2294 138 138 SNP 1 G 2 G/C 60.0/40.0 6/4 10 G 60 6 C 40 4 ConsensusfromContig2304 19 8 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig2315 343 265 SNP 1 G 1 A 100 10 10 A 100 10 ConsensusfromContig2425 66 60 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig2499 193 176 SNP 1 C 1 A 70 7 10 A 70 7 ConsensusfromContig2537 58 53 SNP 1 C 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig2628 212 182 SNP 1 A 1 G 90 9 10 G 90 9 ConsensusfromContig2684 86 80 SNP 1 C 1 T 80 8 10 T 80 8 ConsensusfromContig2745 104 91 SNP 1 C 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig2745 137 113 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig2759 127 111 SNP 1 T 1 A 80 8 10 A 80 8 ConsensusfromContig2981 58 52 SNP 1 G 2 G/A 60.0/40.0 6/4 10 G 60 6 A 40 4 ConsensusfromContig3110 246 210 SNP 1 A 1 C 40 4 10 C 40 4 ConsensusfromContig3135 133 108 SNP 1 C 1 G 100 10 10 G 100 10 ConsensusfromContig3201 509 175 SNP 1 T 2 T/G 60.0/40.0 6/4 10 T 60 6 G 40 4 ConsensusfromContig3219 68 52 SNP 1 A 2 G/A 60.0/40.0 6/4 10 G 60 6 A 40 4 ConsensusfromContig3236 58 58 SNP 1 A 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig3271 60 44 SNP 1 T 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig3274 45 42 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig3280 555 506 SNP 1 C 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig3294 172 158 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig3294 231 210 SNP 1 A 1 G 80 8 10 G 80 8 ConsensusfromContig3301 39 26 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig3316 212 173 SNP 1 A 1 G 80 8 10 G 80 8 ConsensusfromContig3332 489 447 SNP 1 A 1 G 80 8 10 G 80 8 ConsensusfromContig3480 243 139 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig3512 210 173 SNP 1 T 2 C/T 50.0/50.0 5/5 10 C 50 5 T 50 5 ConsensusfromContig3716 142 88 SNP 1 A 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig3758 124 118 SNP 1 T 2 A/T 50.0/50.0 5/5 10 A 50 5 T 50 5 ConsensusfromContig3840 447 414 SNP 1 C 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig3910 160 152 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig4139 67 67 SNP 1 G 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig4177 177 127 SNP 1 G 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig4237 54 32 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig4252 74 55 SNP 1 T 1 A 70 7 10 A 70 7 ConsensusfromContig4293 391 368 SNP 1 N 1 A 100 10 10 A 100 10 ConsensusfromContig4640 125 112 SNP 1 T 1 C 70 7 10 C 70 7 ConsensusfromContig4739 519 401 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig4822 151 86 SNP 1 C 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig4824 229 210 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig4963 365 233 SNP 1 A 1 G 70 7 10 G 70 7 ConsensusfromContig5068 348 307 SNP 1 G 1 T 100 10 10 T 100 10 ConsensusfromContig5079 49 29 SNP 1 T 2 C/T 50.0/50.0 5/5 10 C 50 5 T 50 5 ConsensusfromContig5092 838 795 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig5140 114 106 SNP 1 G 2 G/A 60.0/40.0 6/4 10 G 60 6 A 40 4 ConsensusfromContig5140 117 109 SNP 1 A 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig5140 272 264 SNP 1 C 1 T 70 7 10 T 70 7 ConsensusfromContig5191 470 454 SNP 1 G 2 G/A 60.0/40.0 6/4 10 G 60 6 A 40 4 ConsensusfromContig5205 799 788 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig5234 47 15 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig5239 119 111 SNP 1 G 2 A/G 50.0/40.0 5/4 10 A 50 5 G 40 4 ConsensusfromContig5329 60 46 SNP 1 T 1 C 90 9 10 C 90 9 ConsensusfromContig5461 262 129 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig5526 256 216 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig5597 496 321 SNP 1 T 2 C/T 50.0/50.0 5/5 10 C 50 5 T 50 5 ConsensusfromContig5597 503 328 SNP 1 T 1 A 100 10 10 A 100 10 ConsensusfromContig5635 363 296 SNP 1 C 2 A/C 60.0/40.0 6/4 10 A 60 6 C 40 4 ConsensusfromContig5719 73 68 SNP 1 A 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig5762 623 580 SNP 1 G 1 T 100 10 10 T 100 10 ConsensusfromContig5880 280 154 SNP 1 T 2 T/A 60.0/40.0 6/4 10 T 60 6 A 40 4 ConsensusfromContig5928 285 193 SNP 1 C 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig5964 119 36 SNP 1 G 2 C/G 50.0/50.0 5/5 10 C 50 5 G 50 5 ConsensusfromContig6076 98 96 SNP 1 T 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig6123 26 23 SNP 1 G 2 A/G 60.0/40.0 6/4 10 A 60 6 G 40 4 ConsensusfromContig6169 567 118 SNP 1 G 2 G/A 60.0/40.0 6/4 10 G 60 6 A 40 4 ConsensusfromContig6203 200 108 SNP 1 A 1 C 90 9 10 C 90 9 ConsensusfromContig6291 108 95 SNP 1 A 2 A/C 50.0/50.0 5/5 10 A 50 5 C 50 5 ConsensusfromContig6321 470 381 SNP 1 T 2 T/A 60.0/40.0 6/4 10 T 60 6 A 40 4 ConsensusfromContig6338 149 133 SNP 1 C 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig6435 39 39 SNP 1 A 2 T/A 60.0/40.0 6/4 10 T 60 6 A 40 4 ConsensusfromContig6446 177 177 SNP 1 C 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig6490 68 55 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig6512 232 218 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig6546 437 387 SNP 1 G 2 G/A 60.0/40.0 6/4 10 G 60 6 A 40 4 ConsensusfromContig6622 241 236 SNP 1 G 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig6635 35 16 SNP 1 A 1 G 70 7 10 G 70 7 ConsensusfromContig6681 20 20 SNP 1 C 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig6714 688 532 SNP 1 A 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig6812 342 323 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig6898 139 139 SNP 1 C 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig6947 258 108 SNP 1 A 1 C 70 7 10 C 70 7 ConsensusfromContig6994 130 63 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig7110 291 196 SNP 1 T 2 G/T 50.0/50.0 5/5 10 G 50 5 T 50 5 ConsensusfromContig7190 254 185 SNP 1 C 1 A 90 9 10 A 90 9 ConsensusfromContig7192 151 22 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig7239 189 98 SNP 1 A 1 T 90 9 10 T 90 9 ConsensusfromContig7308 130 57 SNP 1 G 1 T 80 8 10 T 80 8 ConsensusfromContig7402 339 297 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig7460 473 376 SNP 1 C 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig7498 57 20 SNP 1 A 2 C/A 60.0/40.0 6/4 10 C 60 6 A 40 4 ConsensusfromContig7683 182 157 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig7810 353 341 SNP 1 T 1 G 80 8 10 G 80 8 ConsensusfromContig7837 444 381 SNP 1 G 2 G/C 60.0/40.0 6/4 10 G 60 6 C 40 4 ConsensusfromContig7853 361 293 SNP 1 G 1 A 70 7 10 A 70 7 ConsensusfromContig7853 364 296 SNP 1 C 1 T 70 7 10 T 70 7 ConsensusfromContig7858 633 82 SNP 1 G 1 T 90 9 10 T 90 9 ConsensusfromContig7906 630 520 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig8008 147 147 SNP 1 C 2 C/T 60.0/40.0 6/4 10 C 60 6 T 40 4 ConsensusfromContig8091 171 136 SNP 1 A 2 T/A 60.0/40.0 6/4 10 T 60 6 A 40 4 ConsensusfromContig8111 1097 788 SNP 1 T 2 T/C 60.0/40.0 6/4 10 T 60 6 C 40 4 ConsensusfromContig8184 436 412 SNP 1 A 2 A/C 50.0/50.0 5/5 10 A 50 5 C 50 5 ConsensusfromContig8432 161 126 SNP 1 A 1 G 100 10 10 G 100 10 ConsensusfromContig8487 278 228 SNP 1 G 1 A 80 8 10 A 80 8 ConsensusfromContig8570 120 104 SNP 1 A 2 A/G 50.0/50.0 5/5 10 A 50 5 G 50 5 ConsensusfromContig8600 117 78 SNP 1 C 1 T 70 7 10 T 70 7 ConsensusfromContig8635 192 192 SNP 1 T 1 A 70 7 10 A 70 7 ConsensusfromContig8742 408 379 SNP 1 G 1 A 100 10 10 A 100 10 ConsensusfromContig8899 56 53 SNP 1 T 1 C 100 10 10 C 100 10 ConsensusfromContig8935 200 97 SNP 1 A 1 C 100 10 10 C 100 10 ConsensusfromContig9006 67 67 SNP 1 A 2 A/C 60.0/40.0 6/4 10 A 60 6 C 40 4 ConsensusfromContig9010 98 96 SNP 1 C 1 T 100 10 10 T 100 10 ConsensusfromContig9071 572 88 SNP 1 C 1 T 70 7 10 T 70 7 ConsensusfromContig9120 104 55 SNP 1 T 1 A 80 8 10 A 80 8 ConsensusfromContig9288 309 129 SNP 1 G 1 A 70 7 10 A 70 7 ConsensusfromContig280 141 123 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig554 216 188 SNP 1 C 1 T 90.9 10 11 T 90.90909091 10 ConsensusfromContig605 216 200 SNP 1 T 1 G 100 11 11 G 100 11 ConsensusfromContig661 156 135 SNP 1 A 1 G 81.8 9 11 G 81.81818182 9 ConsensusfromContig734 232 172 SNP 1 G 2 A/G 63.6/36.4 7/4 11 A 63.63636364 7 G 36.36363636 4 ConsensusfromContig773 300 274 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig777 99 99 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig795 81 73 SNP 1 G 1 T 90.9 10 11 T 90.90909091 10 ConsensusfromContig829 141 111 SNP 1 G 1 A 72.7 8 11 A 72.72727273 8 ConsensusfromContig843 96 43 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig860 99 27 SNP 1 A 1 C 100 11 11 C 100 11 ConsensusfromContig929 93 92 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig954 250 189 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig1000 22 6 SNP 1 G 1 C 100 11 11 C 100 11 ConsensusfromContig1118 184 176 SNP 1 A 1 G 90.9 10 11 G 90.90909091 10 ConsensusfromContig1137 452 361 SNP 1 T 1 C 81.8 9 11 C 81.81818182 9 ConsensusfromContig1283 774 729 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig1412 363 186 SNP 1 C 1 A 100 11 11 A 100 11 ConsensusfromContig1570 209 209 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig1793 88 70 SNP 1 G 2 G/A 63.6/36.4 7/4 11 G 63.63636364 7 A 36.36363636 4 ConsensusfromContig2021 566 506 SNP 1 G 2 A/G 54.5/45.5 6/5 11 A 54.54545455 6 G 45.45454545 5 ConsensusfromContig2101 204 168 SNP 1 C 1 T 72.7 8 11 T 72.72727273 8 ConsensusfromContig2134 376 325 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig2177 154 152 SNP 1 T 1 C 81.8 9 11 C 81.81818182 9 ConsensusfromContig2245 229 229 SNP 1 G 2 C/G 54.5/45.5 6/5 11 C 54.54545455 6 G 45.45454545 5 ConsensusfromContig2273 106 62 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig2425 63 57 SNP 1 G 2 A/G 54.5/45.5 6/5 11 A 54.54545455 6 G 45.45454545 5 ConsensusfromContig2447 52 25 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig2483 101 101 SNP 1 T 1 C 100 11 11 C 100 11 ConsensusfromContig2507 321 295 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig2508 281 281 SNP 1 G 2 G/A 63.6/36.4 7/4 11 G 63.63636364 7 A 36.36363636 4 ConsensusfromContig2537 197 192 SNP 1 A 2 A/G 63.6/36.4 7/4 11 A 63.63636364 7 G 36.36363636 4 ConsensusfromContig2547 84 84 SNP 1 A 2 T/A 54.5/45.5 6/5 11 T 54.54545455 6 A 45.45454545 5 ConsensusfromContig2547 93 93 SNP 1 G 2 G/A 63.6/36.4 7/4 11 G 63.63636364 7 A 36.36363636 4 ConsensusfromContig2573 318 165 SNP 1 A 2 T/A 54.5/45.5 6/5 11 T 54.54545455 6 A 45.45454545 5 ConsensusfromContig2644 231 231 SNP 1 T 1 G 81.8 9 11 G 81.81818182 9 ConsensusfromContig2758 206 206 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig2788 162 155 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig2796 255 220 SNP 1 T 2 T/G 63.6/36.4 7/4 11 T 63.63636364 7 G 36.36363636 4 ConsensusfromContig2798 96 37 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig3142 422 349 SNP 1 C 2 A/C 54.5/45.5 6/5 11 A 54.54545455 6 C 45.45454545 5 ConsensusfromContig3196 369 349 SNP 1 C 2 C/T 63.6/36.4 7/4 11 C 63.63636364 7 T 36.36363636 4 ConsensusfromContig3258 245 129 SNP 1 T 1 G 100 11 11 G 100 11 ConsensusfromContig3278 159 159 SNP 1 T 2 T/G 63.6/36.4 7/4 11 T 63.63636364 7 G 36.36363636 4 ConsensusfromContig3340 290 290 SNP 1 T 2 T/C 63.6/36.4 7/4 11 T 63.63636364 7 C 36.36363636 4 ConsensusfromContig3356 191 165 SNP 1 C 2 C/T 63.6/36.4 7/4 11 C 63.63636364 7 T 36.36363636 4 ConsensusfromContig3361 33 18 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig3422 160 144 SNP 1 A 2 A/G 54.5/45.5 6/5 11 A 54.54545455 6 G 45.45454545 5 ConsensusfromContig3771 49 34 SNP 1 T 1 G 100 11 11 G 100 11 ConsensusfromContig3801 111 79 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig3809 241 168 SNP 1 C 1 T 81.8 9 11 T 81.81818182 9 ConsensusfromContig3810 221 198 SNP 1 T 2 G/T 63.6/36.4 7/4 11 G 63.63636364 7 T 36.36363636 4 ConsensusfromContig3817 119 104 SNP 1 C 2 G/C 63.6/36.4 7/4 11 G 63.63636364 7 C 36.36363636 4 ConsensusfromContig3820 209 209 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig3895 466 462 SNP 1 A 1 C 81.8 9 11 C 81.81818182 9 ConsensusfromContig3985 252 174 SNP 1 C 1 G 72.7 8 11 G 72.72727273 8 ConsensusfromContig4123 121 104 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig4232 317 307 SNP 1 T 2 T/A 54.5/45.5 6/5 11 T 54.54545455 6 A 45.45454545 5 ConsensusfromContig4249 75 75 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig4279 225 204 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig4344 93 48 SNP 1 T 1 C 100 11 11 C 100 11 ConsensusfromContig4410 90 75 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig4417 208 181 SNP 1 G 1 A 72.7 8 11 A 72.72727273 8 ConsensusfromContig4421 107 100 SNP 1 A 1 C 100 11 11 C 100 11 ConsensusfromContig4590 229 200 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig4639 888 578 SNP 1 T 1 A 100 11 11 A 100 11 ConsensusfromContig4726 15 10 SNP 1 T 1 C 100 11 11 C 100 11 ConsensusfromContig4799 717 616 SNP 1 T 1 G 100 11 11 G 100 11 ConsensusfromContig4908 78 78 SNP 1 C 2 T/C 63.6/36.4 7/4 11 T 63.63636364 7 C 36.36363636 4 ConsensusfromContig5096 417 374 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig5111 421 364 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig5205 279 273 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig5286 173 114 SNP 1 T 2 T/G 63.6/36.4 7/4 11 T 63.63636364 7 G 36.36363636 4 ConsensusfromContig5286 245 176 SNP 1 C 2 C/A 63.6/36.4 7/4 11 C 63.63636364 7 A 36.36363636 4 ConsensusfromContig5384 95 89 SNP 1 G 2 G/C 54.5/45.5 6/5 11 G 54.54545455 6 C 45.45454545 5 ConsensusfromContig5461 208 75 SNP 1 A 1 G 81.8 9 11 G 81.81818182 9 ConsensusfromContig5477 210 186 SNP 1 A 2 A/T 63.6/36.4 7/4 11 A 63.63636364 7 T 36.36363636 4 ConsensusfromContig5506 143 111 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig5506 159 127 SNP 1 T 2 T/A 54.5/45.5 6/5 11 T 54.54545455 6 A 45.45454545 5 ConsensusfromContig5537 211 176 SNP 1 C 2 C/T 63.6/36.4 7/4 11 C 63.63636364 7 T 36.36363636 4 ConsensusfromContig5744 218 166 SNP 1 C 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig5781 58 52 SNP 1 G 2 A/G 54.5/45.5 6/5 11 A 54.54545455 6 G 45.45454545 5 ConsensusfromContig6000 371 352 SNP 1 G 1 C 72.7 8 11 C 72.72727273 8 ConsensusfromContig6007 231 202 SNP 1 T 2 T/C 63.6/36.4 7/4 11 T 63.63636364 7 C 36.36363636 4 ConsensusfromContig6076 92 90 SNP 1 T 2 T/C 54.5/45.5 6/5 11 T 54.54545455 6 C 45.45454545 5 ConsensusfromContig6097 32 22 SNP 1 G 2 G/T 54.5/45.5 6/5 11 G 54.54545455 6 T 45.45454545 5 ConsensusfromContig6128 222 197 SNP 1 G 1 A 90.9 10 11 A 90.90909091 10 ConsensusfromContig6153 203 121 SNP 1 A 1 T 100 11 11 T 100 11 ConsensusfromContig6176 112 109 SNP 1 A 1 G 72.7 8 11 G 72.72727273 8 ConsensusfromContig6214 20 10 SNP 1 A 1 G 90.9 10 11 G 90.90909091 10 ConsensusfromContig6321 481 392 SNP 1 G 2 C/G 63.6/36.4 7/4 11 C 63.63636364 7 G 36.36363636 4 ConsensusfromContig6339 109 78 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig6363 38 23 SNP 1 G 2 G/T 63.6/36.4 7/4 11 G 63.63636364 7 T 36.36363636 4 ConsensusfromContig6432 142 142 SNP 1 G 2 T/G 54.5/45.5 6/5 11 T 54.54545455 6 G 45.45454545 5 ConsensusfromContig6447 221 218 SNP 1 A 1 T 72.7 8 11 T 72.72727273 8 ConsensusfromContig6579 147 147 SNP 1 A 2 T/A 63.6/36.4 7/4 11 T 63.63636364 7 A 36.36363636 4 ConsensusfromContig6607 258 137 SNP 1 A 2 G/A 54.5/45.5 6/5 11 G 54.54545455 6 A 45.45454545 5 ConsensusfromContig6608 268 231 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig6624 20 20 SNP 1 T 1 A 81.8 9 11 A 81.81818182 9 ConsensusfromContig6714 643 487 SNP 1 G 2 G/T 63.6/36.4 7/4 11 G 63.63636364 7 T 36.36363636 4 ConsensusfromContig6922 424 287 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig6938 202 160 SNP 1 T 1 A 100 11 11 A 100 11 ConsensusfromContig6947 232 82 SNP 1 A 1 G 72.7 8 11 G 72.72727273 8 ConsensusfromContig7041 80 69 SNP 1 A 1 T 100 11 11 T 100 11 ConsensusfromContig7041 82 71 SNP 1 A 1 C 72.7 8 11 C 72.72727273 8 ConsensusfromContig7095 41 34 SNP 1 G 1 A 90.9 10 11 A 90.90909091 10 ConsensusfromContig7145 25 25 SNP 1 A 2 T/A 54.5/45.5 6/5 11 T 54.54545455 6 A 45.45454545 5 ConsensusfromContig7179 279 252 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig7335 302 206 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig7370 211 211 SNP 1 T 2 G/T 63.6/36.4 7/4 11 G 63.63636364 7 T 36.36363636 4 ConsensusfromContig7411 25 22 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig7411 249 246 SNP 1 G 2 G/A 63.6/36.4 7/4 11 G 63.63636364 7 A 36.36363636 4 ConsensusfromContig7413 272 225 SNP 1 C 2 T/C 63.6/36.4 7/4 11 T 63.63636364 7 C 36.36363636 4 ConsensusfromContig7418 115 48 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig7460 279 257 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig7495 22 22 SNP 1 C 2 T/C 63.6/36.4 7/4 11 T 63.63636364 7 C 36.36363636 4 ConsensusfromContig7542 338 300 SNP 1 A 1 G 100 11 11 G 100 11 ConsensusfromContig7545 161 127 SNP 1 T 2 T/A 54.5/45.5 6/5 11 T 54.54545455 6 A 45.45454545 5 ConsensusfromContig7728 346 257 SNP 1 T 2 C/T 54.5/45.5 6/5 11 C 54.54545455 6 T 45.45454545 5 ConsensusfromContig7739 432 390 SNP 1 C 1 T 100 11 11 T 100 11 ConsensusfromContig7919 263 191 SNP 1 G 2 G/A 54.5/45.5 6/5 11 G 54.54545455 6 A 45.45454545 5 ConsensusfromContig8091 121 86 SNP 1 C 2 T/C 63.6/36.4 7/4 11 T 63.63636364 7 C 36.36363636 4 ConsensusfromContig8103 108 94 SNP 1 G 1 A 100 11 11 A 100 11 ConsensusfromContig8111 971 698 SNP 1 G 2 G/A 63.6/36.4 7/4 11 G 63.63636364 7 A 36.36363636 4 ConsensusfromContig8152 346 336 SNP 1 T 2 T/C 63.6/36.4 7/4 11 T 63.63636364 7 C 36.36363636 4 ConsensusfromContig8403 682 562 SNP 1 T 2 T/C 54.5/45.5 6/5 11 T 54.54545455 6 C 45.45454545 5 ConsensusfromContig8661 254 20 SNP 1 T 1 C 72.7 8 11 C 72.72727273 8 ConsensusfromContig8688 231 203 SNP 1 T 2 A/T 54.5/45.5 6/5 11 A 54.54545455 6 T 45.45454545 5 ConsensusfromContig8948 40 40 SNP 1 T 2 T/G 63.6/36.4 7/4 11 T 63.63636364 7 G 36.36363636 4 ConsensusfromContig9203 171 115 SNP 1 G 2 G/T 54.5/45.5 6/5 11 G 54.54545455 6 T 45.45454545 5 ConsensusfromContig9252 47 44 SNP 1 A 1 T 81.8 9 11 T 81.81818182 9 ConsensusfromContig9349 575 282 SNP 1 T 1 G 90.9 10 11 G 90.90909091 10 ConsensusfromContig8 114 114 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig87 23 23 SNP 1 G 2 A/G 50.0/50.0 6/6 12 A 50 6 G 50 6 ConsensusfromContig296 280 267 SNP 1 G 1 T 75 9 12 T 75 9 ConsensusfromContig346 91 72 SNP 1 A 1 C 91.7 11 12 C 91.66666667 11 ConsensusfromContig357 113 98 SNP 1 A 2 A/T 50.0/50.0 6/6 12 A 50 6 T 50 6 ConsensusfromContig380 201 93 SNP 1 T 2 T/G 58.3/41.7 7/5 12 T 58.33333333 7 G 41.66666667 5 ConsensusfromContig573 92 75 SNP 1 G 1 A 100 12 12 A 100 12 ConsensusfromContig646 447 423 SNP 1 T 2 C/T 58.3/41.7 7/5 12 C 58.33333333 7 T 41.66666667 5 ConsensusfromContig672 280 279 SNP 1 A 2 T/A 58.3/41.7 7/5 12 T 58.33333333 7 A 41.66666667 5 ConsensusfromContig704 136 102 SNP 1 A 1 C 91.7 11 12 C 91.66666667 11 ConsensusfromContig805 104 99 SNP 1 A 1 C 100 12 12 C 100 12 ConsensusfromContig1006 451 412 SNP 1 A 1 G 75 9 12 G 75 9 ConsensusfromContig1137 495 404 SNP 1 G 1 T 100 12 12 T 100 12 ConsensusfromContig1141 665 580 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig1187 324 205 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig1215 46 39 SNP 1 A 2 A/G 58.3/41.7 7/5 12 A 58.33333333 7 G 41.66666667 5 ConsensusfromContig1508 11 11 SNP 1 T 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig1569 350 337 SNP 1 A 2 T/A 58.3/41.7 7/5 12 T 58.33333333 7 A 41.66666667 5 ConsensusfromContig1734 126 120 SNP 1 C 1 T 83.3 10 12 T 83.33333333 10 ConsensusfromContig1750 435 337 SNP 1 G 2 A/G 50.0/50.0 6/6 12 A 50 6 G 50 6 ConsensusfromContig1896 162 120 SNP 1 T 1 C 100 12 12 C 100 12 ConsensusfromContig2045 423 406 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig2117 319 235 SNP 1 A 2 G/A 58.3/41.7 7/5 12 G 58.33333333 7 A 41.66666667 5 ConsensusfromContig2119 251 72 SNP 1 A 1 C 100 12 12 C 100 12 ConsensusfromContig2119 477 274 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig2156 86 48 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig2177 443 423 SNP 1 G 1 A 91.7 11 12 A 91.66666667 11 ConsensusfromContig2203 62 38 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig2330 100 100 SNP 1 T 2 A/T 58.3/41.7 7/5 12 A 58.33333333 7 T 41.66666667 5 ConsensusfromContig2479 96 90 SNP 1 C 2 C/T 58.3/41.7 7/5 12 C 58.33333333 7 T 41.66666667 5 ConsensusfromContig2482 259 209 SNP 1 G 2 G/C 58.3/41.7 7/5 12 G 58.33333333 7 C 41.66666667 5 ConsensusfromContig2576 353 273 SNP 1 C 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig2618 99 99 SNP 1 T 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig2618 129 129 SNP 1 G 2 G/T 58.3/41.7 7/5 12 G 58.33333333 7 T 41.66666667 5 ConsensusfromContig2806 204 180 SNP 1 A 2 A/G 58.3/41.7 7/5 12 A 58.33333333 7 G 41.66666667 5 ConsensusfromContig3110 186 150 SNP 1 T 2 C/T 50.0/50.0 6/6 12 C 50 6 T 50 6 ConsensusfromContig3153 96 96 SNP 1 A 1 T 75 9 12 T 75 9 ConsensusfromContig3166 362 350 SNP 1 T 2 G/T 58.3/41.7 7/5 12 G 58.33333333 7 T 41.66666667 5 ConsensusfromContig3202 150 124 SNP 1 A 2 G/A 58.3/41.7 7/5 12 G 58.33333333 7 A 41.66666667 5 ConsensusfromContig3294 79 65 SNP 1 C 1 G 58.3 7 12 G 58.33333333 7 ConsensusfromContig3313 1075 578 SNP 1 T 1 C 91.7 11 12 C 91.66666667 11 ConsensusfromContig3578 417 404 SNP 1 C 1 A 100 12 12 A 100 12 ConsensusfromContig3604 48 48 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig3696 160 131 SNP 1 C 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig3885 362 191 SNP 1 T 2 T/G 58.3/41.7 7/5 12 T 58.33333333 7 G 41.66666667 5 ConsensusfromContig3999 329 247 SNP 1 A 2 G/A 58.3/41.7 7/5 12 G 58.33333333 7 A 41.66666667 5 ConsensusfromContig4037 20 20 SNP 1 G 2 G/A 58.3/41.7 7/5 12 G 58.33333333 7 A 41.66666667 5 ConsensusfromContig4177 163 113 SNP 1 C 2 C/T 50.0/50.0 6/6 12 C 50 6 T 50 6 ConsensusfromContig4226 340 143 SNP 1 G 1 C 91.7 11 12 C 91.66666667 11 ConsensusfromContig4421 30 23 SNP 1 G 1 A 100 12 12 A 100 12 ConsensusfromContig4560 288 278 SNP 1 T 2 A/T 50.0/50.0 6/6 12 A 50 6 T 50 6 ConsensusfromContig4639 867 557 SNP 1 A 1 C 91.7 11 12 C 91.66666667 11 ConsensusfromContig4758 383 315 SNP 1 T 1 C 83.3 10 12 C 83.33333333 10 ConsensusfromContig4908 87 87 SNP 1 A 2 G/A 58.3/41.7 7/5 12 G 58.33333333 7 A 41.66666667 5 ConsensusfromContig4911 133 86 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig4911 741 618 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig4948 393 315 SNP 1 G 2 A/G 58.3/41.7 7/5 12 A 58.33333333 7 G 41.66666667 5 ConsensusfromContig5033 109 95 SNP 1 A 1 C 66.7 8 12 C 66.66666667 8 ConsensusfromContig5091 49 19 SNP 1 C 2 C/T 50.0/50.0 6/6 12 C 50 6 T 50 6 ConsensusfromContig5140 23 23 SNP 1 T 2 C/T 50.0/50.0 6/6 12 C 50 6 T 50 6 ConsensusfromContig5140 150 142 SNP 1 G 1 A 100 12 12 A 100 12 ConsensusfromContig5160 388 364 SNP 1 C 1 T 75 9 12 T 75 9 ConsensusfromContig5164 33 33 SNP 1 N 1 T 100 12 12 T 100 12 ConsensusfromContig5205 516 510 SNP 1 T 1 C 75 9 12 C 75 9 ConsensusfromContig5435 271 173 SNP 1 C 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig5485 519 418 SNP 1 A 1 C 100 12 12 C 100 12 ConsensusfromContig5547 238 230 SNP 1 A 2 A/C 58.3/41.7 7/5 12 A 58.33333333 7 C 41.66666667 5 ConsensusfromContig5597 553 378 SNP 1 T 1 C 100 12 12 C 100 12 ConsensusfromContig5635 429 362 SNP 1 G 2 T/G 58.3/41.7 7/5 12 T 58.33333333 7 G 41.66666667 5 ConsensusfromContig5762 770 716 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig5874 212 184 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig5904 431 255 SNP 1 T 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig5943 57 57 SNP 1 A 2 G/A 58.3/41.7 7/5 12 G 58.33333333 7 A 41.66666667 5 ConsensusfromContig6176 31 31 SNP 1 G 2 A/G 58.3/41.7 7/5 12 A 58.33333333 7 G 41.66666667 5 ConsensusfromContig6207 159 156 SNP 1 T 2 C/T 50.0/50.0 6/6 12 C 50 6 T 50 6 ConsensusfromContig6217 84 84 SNP 1 G 1 C 100 12 12 C 100 12 ConsensusfromContig6242 20 19 SNP 1 A 1 G 83.3 10 12 G 83.33333333 10 ConsensusfromContig6289 106 98 SNP 1 T 1 C 66.7 8 12 C 66.66666667 8 ConsensusfromContig6373 130 102 SNP 1 T 1 C 100 12 12 C 100 12 ConsensusfromContig6402 255 238 SNP 1 C 2 C/T 50.0/50.0 6/6 12 C 50 6 T 50 6 ConsensusfromContig6435 44 44 SNP 1 A 2 A/C 58.3/41.7 7/5 12 A 58.33333333 7 C 41.66666667 5 ConsensusfromContig6523 312 286 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig6560 643 500 SNP 1 G 1 T 66.7 8 12 T 66.66666667 8 ConsensusfromContig6579 124 124 SNP 1 G 1 A 75 9 12 A 75 9 ConsensusfromContig6680 77 63 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig7095 44 37 SNP 1 T 1 G 83.3 10 12 G 83.33333333 10 ConsensusfromContig7147 154 59 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig7409 74 74 SNP 1 T 1 C 100 12 12 C 100 12 ConsensusfromContig7413 155 108 SNP 1 T 1 C 75 9 12 C 75 9 ConsensusfromContig7452 215 170 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig7583 112 112 SNP 1 T 2 G/T 50.0/50.0 6/6 12 G 50 6 T 50 6 ConsensusfromContig7685 256 234 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig7727 208 181 SNP 1 G 1 A 100 12 12 A 100 12 ConsensusfromContig7877 131 101 SNP 1 A 2 A/G 58.3/41.7 7/5 12 A 58.33333333 7 G 41.66666667 5 ConsensusfromContig7877 338 308 SNP 1 C 2 C/T 58.3/41.7 7/5 12 C 58.33333333 7 T 41.66666667 5 ConsensusfromContig7892 521 464 SNP 1 C 1 A 83.3 10 12 A 83.33333333 10 ConsensusfromContig7943 652 607 SNP 1 C 1 T 100 12 12 T 100 12 ConsensusfromContig8090 327 238 SNP 1 A 2 A/G 58.3/41.7 7/5 12 A 58.33333333 7 G 41.66666667 5 ConsensusfromContig8111 712 446 SNP 1 G 2 A/G 50.0/50.0 6/6 12 A 50 6 G 50 6 ConsensusfromContig8223 613 539 SNP 1 G 1 A 100 12 12 A 100 12 ConsensusfromContig8329 500 256 SNP 1 T 1 A 91.7 11 12 A 91.66666667 11 ConsensusfromContig8377 538 117 SNP 1 A 2 A/G 50.0/50.0 6/6 12 A 50 6 G 50 6 ConsensusfromContig8403 292 203 SNP 1 C 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig8482 263 206 SNP 1 C 1 T 91.7 11 12 T 91.66666667 11 ConsensusfromContig8639 441 372 SNP 1 T 2 C/T 58.3/41.7 7/5 12 C 58.33333333 7 T 41.66666667 5 ConsensusfromContig8679 217 127 SNP 1 C 2 C/G 58.3/41.7 7/5 12 C 58.33333333 7 G 41.66666667 5 ConsensusfromContig8811 14 14 SNP 1 A 1 G 100 12 12 G 100 12 ConsensusfromContig8827 28 28 SNP 1 A 1 G 75 9 12 G 75 9 ConsensusfromContig8895 29 29 SNP 1 T 2 T/C 58.3/41.7 7/5 12 T 58.33333333 7 C 41.66666667 5 ConsensusfromContig8990 116 100 SNP 1 A 1 G 91.7 11 12 G 91.66666667 11 ConsensusfromContig8995 113 109 SNP 1 A 1 T 66.7 8 12 T 66.66666667 8 ConsensusfromContig9336 13 13 SNP 1 C 2 C/T 50.0/50.0 6/6 12 C 50 6 T 50 6 ConsensusfromContig42 32 26 SNP 1 C 2 T/C 61.5/38.5 8/5 13 T 61.53846154 8 C 38.46153846 5 ConsensusfromContig270 408 375 SNP 1 G 1 A 100 13 13 A 100 13 ConsensusfromContig452 315 285 SNP 1 T 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig506 212 146 SNP 1 G 1 A 100 13 13 A 100 13 ConsensusfromContig605 201 185 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig786 255 199 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig786 303 228 SNP 1 A 2 G/A 61.5/38.5 8/5 13 G 61.53846154 8 A 38.46153846 5 ConsensusfromContig1118 211 203 SNP 1 T 1 C 69.2 9 13 C 69.23076923 9 ConsensusfromContig1137 413 322 SNP 1 G 1 T 76.9 10 13 T 76.92307692 10 ConsensusfromContig1141 534 449 SNP 1 A 1 T 76.9 10 13 T 76.92307692 10 ConsensusfromContig1206 285 158 SNP 1 A 2 A/C 61.5/38.5 8/5 13 A 61.53846154 8 C 38.46153846 5 ConsensusfromContig1209 57 27 SNP 1 T 1 C 100 13 13 C 100 13 ConsensusfromContig1209 108 78 SNP 1 A 2 A/T 53.8/46.2 7/6 13 A 53.84615385 7 T 46.15384615 6 ConsensusfromContig1209 733 620 SNP 1 T 2 T/C 61.5/38.5 8/5 13 T 61.53846154 8 C 38.46153846 5 ConsensusfromContig1459 797 677 SNP 1 A 2 A/C 61.5/38.5 8/5 13 A 61.53846154 8 C 38.46153846 5 ConsensusfromContig1538 43 24 SNP 1 G 1 C 69.2 9 13 C 69.23076923 9 ConsensusfromContig1618 136 125 SNP 1 T 1 G 100 13 13 G 100 13 ConsensusfromContig1932 80 66 SNP 1 T 1 C 100 13 13 C 100 13 ConsensusfromContig2117 508 421 SNP 1 T 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig2379 40 39 SNP 1 C 2 C/T 53.8/46.2 7/6 13 C 53.84615385 7 T 46.15384615 6 ConsensusfromContig2388 408 378 SNP 1 G 1 T 76.9 10 13 T 76.92307692 10 ConsensusfromContig2485 327 262 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig2525 134 114 SNP 1 G 1 T 100 13 13 T 100 13 ConsensusfromContig2613 123 119 SNP 1 G 1 A 69.2 9 13 A 69.23076923 9 ConsensusfromContig2684 26 20 SNP 1 G 2 A/G 46.2/46.2 6/6 13 A 46.15384615 6 G 46.15384615 6 ConsensusfromContig2702 66 48 SNP 1 C 1 A 69.2 9 13 A 69.23076923 9 ConsensusfromContig2790 40 38 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig2798 249 190 SNP 1 C 2 C/T 53.8/46.2 7/6 13 C 53.84615385 7 T 46.15384615 6 ConsensusfromContig2857 231 187 SNP 1 T 1 C 100 13 13 C 100 13 ConsensusfromContig3035 226 221 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig3152 271 252 SNP 1 G 1 A 100 13 13 A 100 13 ConsensusfromContig3158 183 183 SNP 1 G 1 A 84.6 11 13 A 84.61538462 11 ConsensusfromContig3291 333 276 SNP 1 G 2 G/T 61.5/38.5 8/5 13 G 61.53846154 8 T 38.46153846 5 ConsensusfromContig3432 224 143 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig3601 76 61 SNP 1 G 1 A 92.3 12 13 A 92.30769231 12 ConsensusfromContig3771 153 127 SNP 1 G 1 A 76.9 10 13 A 76.92307692 10 ConsensusfromContig3895 159 155 SNP 1 G 1 A 100 13 13 A 100 13 ConsensusfromContig3895 171 167 SNP 1 T 1 C 100 13 13 C 100 13 ConsensusfromContig4058 136 89 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig4134 88 33 SNP 1 G 2 G/A 53.8/46.2 7/6 13 G 53.84615385 7 A 46.15384615 6 ConsensusfromContig4433 134 113 SNP 1 A 1 G 92.3 12 13 G 92.30769231 12 ConsensusfromContig4510 76 63 SNP 1 G 1 A 76.9 10 13 A 76.92307692 10 ConsensusfromContig4539 139 95 SNP 1 C 1 G 53.8 7 13 G 53.84615385 7 ConsensusfromContig4539 184 140 SNP 1 A 1 T 100 13 13 T 100 13 ConsensusfromContig4586 71 43 SNP 1 G 1 C 84.6 11 13 C 84.61538462 11 ConsensusfromContig4638 219 146 SNP 1 T 2 T/C 61.5/38.5 8/5 13 T 61.53846154 8 C 38.46153846 5 ConsensusfromContig4811 50 50 SNP 1 T 2 T/C 61.5/38.5 8/5 13 T 61.53846154 8 C 38.46153846 5 ConsensusfromContig4910 135 121 SNP 1 A 2 A/C 61.5/38.5 8/5 13 A 61.53846154 8 C 38.46153846 5 ConsensusfromContig4948 399 321 SNP 1 G 1 A 100 13 13 A 100 13 ConsensusfromContig5020 179 137 SNP 1 G 2 G/A 61.5/38.5 8/5 13 G 61.53846154 8 A 38.46153846 5 ConsensusfromContig5044 121 94 SNP 1 T 1 G 84.6 11 13 G 84.61538462 11 ConsensusfromContig5091 586 549 SNP 1 G 1 A 100 13 13 A 100 13 ConsensusfromContig5104 51 36 SNP 1 C 1 G 100 13 13 G 100 13 ConsensusfromContig5131 354 297 SNP 1 A 2 A/G 53.8/46.2 7/6 13 A 53.84615385 7 G 46.15384615 6 ConsensusfromContig5168 281 268 SNP 1 G 2 G/A 61.5/38.5 8/5 13 G 61.53846154 8 A 38.46153846 5 ConsensusfromContig5186 192 15 SNP 1 A 1 T 100 13 13 T 100 13 ConsensusfromContig5236 314 283 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig5310 200 65 SNP 1 A 1 C 69.2 9 13 C 69.23076923 9 ConsensusfromContig5362 237 230 SNP 1 T 1 G 92.3 12 13 G 92.30769231 12 ConsensusfromContig5365 598 520 SNP 1 G 2 A/G 53.8/46.2 7/6 13 A 53.84615385 7 G 46.15384615 6 ConsensusfromContig5617 13 5 SNP 1 T 1 C 69.2 9 13 C 69.23076923 9 ConsensusfromContig5630 209 153 SNP 1 T 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig5645 200 182 SNP 1 T 1 G 76.9 10 13 G 76.92307692 10 ConsensusfromContig5803 143 143 SNP 1 C 2 G/C 53.8/46.2 7/6 13 G 53.84615385 7 C 46.15384615 6 ConsensusfromContig5901 112 112 SNP 1 C 1 T 69.2 9 13 T 69.23076923 9 ConsensusfromContig5946 47 47 SNP 1 C 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig5960 202 139 SNP 1 T 2 T/G 53.8/46.2 7/6 13 T 53.84615385 7 G 46.15384615 6 ConsensusfromContig5983 85 74 SNP 1 G 1 A 92.3 12 13 A 92.30769231 12 ConsensusfromContig6047 68 34 SNP 1 T 2 G/T 61.5/38.5 8/5 13 G 61.53846154 8 T 38.46153846 5 ConsensusfromContig6097 145 135 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig6168 45 45 SNP 1 C 1 T 61.5 8 13 T 61.53846154 8 ConsensusfromContig6209 11 5 SNP 1 T 1 C 100 13 13 C 100 13 ConsensusfromContig6321 468 379 SNP 1 C 2 C/A 53.8/46.2 7/6 13 C 53.84615385 7 A 46.15384615 6 ConsensusfromContig6557 147 137 SNP 1 C 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig6668 47 47 SNP 1 G 1 A 100 13 13 A 100 13 ConsensusfromContig6790 57 36 SNP 1 C 1 A 76.9 10 13 A 76.92307692 10 ConsensusfromContig6828 94 15 SNP 1 C 2 C/A 61.5/38.5 8/5 13 C 61.53846154 8 A 38.46153846 5 ConsensusfromContig6842 336 330 SNP 1 C 2 A/C 53.8/46.2 7/6 13 A 53.84615385 7 C 46.15384615 6 ConsensusfromContig6922 264 127 SNP 1 A 1 T 84.6 11 13 T 84.61538462 11 ConsensusfromContig6931 196 162 SNP 1 A 1 G 92.3 12 13 G 92.30769231 12 ConsensusfromContig7035 193 104 SNP 1 A 1 T 100 13 13 T 100 13 ConsensusfromContig7207 90 85 SNP 1 G 2 C/G 53.8/46.2 7/6 13 C 53.84615385 7 G 46.15384615 6 ConsensusfromContig7332 475 299 SNP 1 A 2 G/A 61.5/38.5 8/5 13 G 61.53846154 8 A 38.46153846 5 ConsensusfromContig7460 455 358 SNP 1 G 2 G/T 61.5/38.5 8/5 13 G 61.53846154 8 T 38.46153846 5 ConsensusfromContig7464 100 61 SNP 1 C 1 G 76.9 10 13 G 76.92307692 10 ConsensusfromContig7508 115 115 SNP 1 G 1 T 100 13 13 T 100 13 ConsensusfromContig7943 660 615 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig8027 557 428 SNP 1 G 2 A/G 53.8/46.2 7/6 13 A 53.84615385 7 G 46.15384615 6 ConsensusfromContig8075 477 309 SNP 1 A 1 C 92.3 12 13 C 92.30769231 12 ConsensusfromContig8075 675 507 SNP 1 T 1 C 84.6 11 13 C 84.61538462 11 ConsensusfromContig8091 73 38 SNP 1 C 2 T/C 53.8/46.2 7/6 13 T 53.84615385 7 C 46.15384615 6 ConsensusfromContig8091 81 46 SNP 1 C 2 C/A 61.5/38.5 8/5 13 C 61.53846154 8 A 38.46153846 5 ConsensusfromContig8091 113 78 SNP 1 A 1 G 100 13 13 G 100 13 ConsensusfromContig8100 40 27 SNP 1 A 1 T 100 13 13 T 100 13 ConsensusfromContig8171 188 186 SNP 1 A 2 G/A 61.5/38.5 8/5 13 G 61.53846154 8 A 38.46153846 5 ConsensusfromContig8200 159 111 SNP 1 G 1 A 92.3 12 13 A 92.30769231 12 ConsensusfromContig8218 299 189 SNP 1 C 1 A 84.6 11 13 A 84.61538462 11 ConsensusfromContig8336 62 44 SNP 1 G 2 G/A 53.8/46.2 7/6 13 G 53.84615385 7 A 46.15384615 6 ConsensusfromContig8336 185 167 SNP 1 T 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig8403 526 412 SNP 1 T 2 C/T 61.5/38.5 8/5 13 C 61.53846154 8 T 38.46153846 5 ConsensusfromContig8537 172 137 SNP 1 G 2 G/C 61.5/38.5 8/5 13 G 61.53846154 8 C 38.46153846 5 ConsensusfromContig8742 166 137 SNP 1 G 1 A 100 13 13 A 100 13 ConsensusfromContig9017 179 172 SNP 1 T 2 T/C 61.5/38.5 8/5 13 T 61.53846154 8 C 38.46153846 5 ConsensusfromContig9223 277 264 SNP 1 C 1 T 100 13 13 T 100 13 ConsensusfromContig9326 22 22 SNP 1 A 1 C 100 13 13 C 100 13 ConsensusfromContig168 183 182 SNP 1 A 2 A/G 57.1/42.9 8/6 14 A 57.14285714 8 G 42.85714286 6 ConsensusfromContig530 374 278 SNP 1 C 1 A 78.6 11 14 A 78.57142857 11 ConsensusfromContig661 160 139 SNP 1 T 2 T/C 57.1/42.9 8/6 14 T 57.14285714 8 C 42.85714286 6 ConsensusfromContig722 81 81 SNP 1 A 1 T 100 14 14 T 100 14 ConsensusfromContig781 145 117 SNP 1 G 1 A 92.9 13 14 A 92.85714286 13 ConsensusfromContig820 80 80 SNP 1 G 2 G/A 57.1/42.9 8/6 14 G 57.14285714 8 A 42.85714286 6 ConsensusfromContig861 433 333 SNP 1 G 1 A 100 14 14 A 100 14 ConsensusfromContig929 163 162 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig1186 182 165 SNP 1 T 1 C 100 14 14 C 100 14 ConsensusfromContig1215 97 90 SNP 1 A 1 T 71.4 10 14 T 71.42857143 10 ConsensusfromContig1296 12 6 SNP 1 T 1 G 100 14 14 G 100 14 ConsensusfromContig1557 310 231 SNP 1 T 1 C 71.4 10 14 C 71.42857143 10 ConsensusfromContig1623 86 86 SNP 1 T 1 C 85.7 12 14 C 85.71428571 12 ConsensusfromContig1865 254 175 SNP 1 G 1 A 78.6 11 14 A 78.57142857 11 ConsensusfromContig1982 321 156 SNP 1 G 2 G/T 64.3/35.7 9/5 14 G 64.28571429 9 T 35.71428571 5 ConsensusfromContig2017 273 227 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig2049 270 255 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig2092 165 165 SNP 1 T 1 A 71.4 10 14 A 71.42857143 10 ConsensusfromContig2139 251 136 SNP 1 A 1 C 100 14 14 C 100 14 ConsensusfromContig2212 53 43 SNP 1 T 1 C 100 14 14 C 100 14 ConsensusfromContig2317 36 28 SNP 1 T 1 C 71.4 10 14 C 71.42857143 10 ConsensusfromContig2499 116 100 SNP 1 T 2 T/C 57.1/42.9 8/6 14 T 57.14285714 8 C 42.85714286 6 ConsensusfromContig2562 634 568 SNP 1 A 1 C 100 14 14 C 100 14 ConsensusfromContig2581 59 35 SNP 1 T 1 G 71.4 10 14 G 71.42857143 10 ConsensusfromContig2759 208 192 SNP 1 T 1 C 71.4 10 14 C 71.42857143 10 ConsensusfromContig2764 183 176 SNP 1 C 2 C/T 57.1/42.9 8/6 14 C 57.14285714 8 T 42.85714286 6 ConsensusfromContig2806 188 164 SNP 1 C 2 C/A 64.3/35.7 9/5 14 C 64.28571429 9 A 35.71428571 5 ConsensusfromContig2857 75 35 SNP 1 G 2 G/A 64.3/35.7 9/5 14 G 64.28571429 9 A 35.71428571 5 ConsensusfromContig3021 512 292 SNP 1 G 1 C 78.6 11 14 C 78.57142857 11 ConsensusfromContig3039 356 341 SNP 1 T 2 A/T 64.3/35.7 9/5 14 A 64.28571429 9 T 35.71428571 5 ConsensusfromContig3039 358 343 SNP 1 C 2 A/C 64.3/35.7 9/5 14 A 64.28571429 9 C 35.71428571 5 ConsensusfromContig3238 286 272 SNP 1 G 2 A/G 64.3/35.7 9/5 14 A 64.28571429 9 G 35.71428571 5 ConsensusfromContig3256 211 158 SNP 1 G 2 A/G 50.0/50.0 7/7 14 A 50 7 G 50 7 ConsensusfromContig3470 101 80 SNP 1 G 1 C 71.4 10 14 C 71.42857143 10 ConsensusfromContig3540 190 122 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig3610 84 56 SNP 1 A 2 A/G 50.0/50.0 7/7 14 A 50 7 G 50 7 ConsensusfromContig3694 297 207 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig3758 128 122 SNP 1 A 2 A/G 57.1/42.9 8/6 14 A 57.14285714 8 G 42.85714286 6 ConsensusfromContig3838 416 339 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig3895 447 443 SNP 1 T 2 T/G 57.1/35.7 8/5 14 T 57.14285714 8 G 35.71428571 5 ConsensusfromContig4028 209 204 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig4260 264 109 SNP 1 A 1 T 100 14 14 T 100 14 ConsensusfromContig4287 203 167 SNP 1 T 1 G 92.9 13 14 G 92.85714286 13 ConsensusfromContig4335 401 297 SNP 1 T 2 C/T 50.0/50.0 7/7 14 C 50 7 T 50 7 ConsensusfromContig4579 114 114 SNP 1 T 1 C 85.7 12 14 C 85.71428571 12 ConsensusfromContig4593 302 203 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig4644 653 351 SNP 1 A 1 C 71.4 10 14 C 71.42857143 10 ConsensusfromContig4782 91 61 SNP 1 C 1 A 85.7 12 14 A 85.71428571 12 ConsensusfromContig4975 86 83 SNP 1 T 1 C 100 14 14 C 100 14 ConsensusfromContig5079 267 245 SNP 1 G 1 A 92.9 13 14 A 92.85714286 13 ConsensusfromContig5171 439 374 SNP 1 C 1 G 78.6 11 14 G 78.57142857 11 ConsensusfromContig5205 356 350 SNP 1 G 2 G/A 57.1/42.9 8/6 14 G 57.14285714 8 A 42.85714286 6 ConsensusfromContig5254 205 190 SNP 1 A 2 G/A 64.3/35.7 9/5 14 G 64.28571429 9 A 35.71428571 5 ConsensusfromContig5461 185 52 SNP 1 A 1 G 85.7 12 14 G 85.71428571 12 ConsensusfromContig5622 342 296 SNP 1 T 1 C 100 14 14 C 100 14 ConsensusfromContig5636 323 323 SNP 1 G 1 A 85.7 12 14 A 85.71428571 12 ConsensusfromContig5735 493 468 SNP 1 C 2 A/C 50.0/50.0 7/7 14 A 50 7 C 50 7 ConsensusfromContig5762 622 579 SNP 1 C 1 A 100 14 14 A 100 14 ConsensusfromContig5822 158 73 SNP 1 G 1 T 85.7 12 14 T 85.71428571 12 ConsensusfromContig5828 346 227 SNP 1 T 2 A/T 64.3/35.7 9/5 14 A 64.28571429 9 T 35.71428571 5 ConsensusfromContig5922 134 134 SNP 1 C 2 C/G 64.3/35.7 9/5 14 C 64.28571429 9 G 35.71428571 5 ConsensusfromContig6011 337 301 SNP 1 G 1 A 100 14 14 A 100 14 ConsensusfromContig6021 90 71 SNP 1 G 2 G/A 64.3/35.7 9/5 14 G 64.28571429 9 A 35.71428571 5 ConsensusfromContig6101 133 114 SNP 1 T 1 G 100 14 14 G 100 14 ConsensusfromContig6111 476 301 SNP 1 T 1 G 100 14 14 G 100 14 ConsensusfromContig6116 163 152 SNP 1 C 1 T 92.9 13 14 T 92.85714286 13 ConsensusfromContig6187 160 123 SNP 1 G 1 A 78.6 11 14 A 78.57142857 11 ConsensusfromContig6210 303 275 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig6214 25 15 SNP 1 T 1 A 92.9 13 14 A 92.85714286 13 ConsensusfromContig6289 126 118 SNP 1 C 1 A 100 14 14 A 100 14 ConsensusfromContig6329 213 159 SNP 1 T 1 C 92.9 13 14 C 92.85714286 13 ConsensusfromContig6329 269 215 SNP 1 T 1 C 92.9 13 14 C 92.85714286 13 ConsensusfromContig6360 56 29 SNP 1 A 1 T 100 14 14 T 100 14 ConsensusfromContig6481 128 128 SNP 1 A 2 A/G 64.3/35.7 9/5 14 A 64.28571429 9 G 35.71428571 5 ConsensusfromContig6546 368 318 SNP 1 A 2 A/C 64.3/35.7 9/5 14 A 64.28571429 9 C 35.71428571 5 ConsensusfromContig6647 114 77 SNP 1 A 2 C/A 57.1/42.9 8/6 14 C 57.14285714 8 A 42.85714286 6 ConsensusfromContig6680 46 32 SNP 1 T 2 C/T 57.1/42.9 8/6 14 C 57.14285714 8 T 42.85714286 6 ConsensusfromContig6728 424 336 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig6993 386 291 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig7007 288 263 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig7110 142 56 SNP 1 A 1 G 92.9 13 14 G 92.85714286 13 ConsensusfromContig7113 549 408 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig7185 280 210 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig7246 266 221 SNP 1 A 1 G 71.4 10 14 G 71.42857143 10 ConsensusfromContig7508 114 114 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig7529 93 91 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig7580 535 474 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig7583 118 118 SNP 1 A 2 A/C 42.9/42.9 6/6 14 A 42.85714286 6 C 42.85714286 6 ConsensusfromContig7673 150 129 SNP 1 A 1 C 100 14 14 C 100 14 ConsensusfromContig7727 209 182 SNP 1 C 1 T 100 14 14 T 100 14 ConsensusfromContig7804 399 147 SNP 1 C 1 T 85.7 12 14 T 85.71428571 12 ConsensusfromContig7977 42 42 SNP 1 A 1 G 85.7 12 14 G 85.71428571 12 ConsensusfromContig8111 950 677 SNP 1 G 2 G/A 57.1/42.9 8/6 14 G 57.14285714 8 A 42.85714286 6 ConsensusfromContig8157 157 128 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig8194 495 378 SNP 1 T 2 T/A 57.1/42.9 8/6 14 T 57.14285714 8 A 42.85714286 6 ConsensusfromContig8336 338 320 SNP 1 A 1 G 78.6 11 14 G 78.57142857 11 ConsensusfromContig8375 64 45 SNP 1 C 2 T/C 57.1/42.9 8/6 14 T 57.14285714 8 C 42.85714286 6 ConsensusfromContig8375 117 98 SNP 1 A 2 A/G 57.1/42.9 8/6 14 A 57.14285714 8 G 42.85714286 6 ConsensusfromContig8403 628 514 SNP 1 C 2 T/C 64.3/35.7 9/5 14 T 64.28571429 9 C 35.71428571 5 ConsensusfromContig8483 252 238 SNP 1 T 2 T/C 57.1/42.9 8/6 14 T 57.14285714 8 C 42.85714286 6 ConsensusfromContig8483 257 243 SNP 1 A 2 A/C 57.1/42.9 8/6 14 A 57.14285714 8 C 42.85714286 6 ConsensusfromContig8496 316 185 SNP 1 C 1 G 71.4 10 14 G 71.42857143 10 ConsensusfromContig8624 39 33 SNP 1 A 2 C/A 64.3/35.7 9/5 14 C 64.28571429 9 A 35.71428571 5 ConsensusfromContig8639 243 189 SNP 1 C 2 T/C 64.3/35.7 9/5 14 T 64.28571429 9 C 35.71428571 5 ConsensusfromContig8661 288 54 SNP 1 A 2 C/A 64.3/35.7 9/5 14 C 64.28571429 9 A 35.71428571 5 ConsensusfromContig8705 241 215 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig8920 181 145 SNP 1 A 2 A/G 64.3/35.7 9/5 14 A 64.28571429 9 G 35.71428571 5 ConsensusfromContig9006 286 286 SNP 1 A 1 G 100 14 14 G 100 14 ConsensusfromContig9216 594 307 SNP 1 A 2 A/C 64.3/35.7 9/5 14 A 64.28571429 9 C 35.71428571 5 ConsensusfromContig292 130 130 SNP 1 T 2 A/T 53.3/46.7 8/7 15 A 53.33333333 8 T 46.66666667 7 ConsensusfromContig293 30 30 SNP 1 A 2 C/A 53.3/46.7 8/7 15 C 53.33333333 8 A 46.66666667 7 ConsensusfromContig437 51 49 SNP 1 A 1 G 100 15 15 G 100 15 ConsensusfromContig605 253 237 SNP 1 C 2 T/C 60.0/40.0 9/6 15 T 60 9 C 40 6 ConsensusfromContig828 144 141 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig869 77 51 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig1118 61 53 SNP 1 C 1 T 66.7 10 15 T 66.66666667 10 ConsensusfromContig1172 207 183 SNP 1 C 2 C/T 53.3/46.7 8/7 15 C 53.33333333 8 T 46.66666667 7 ConsensusfromContig1182 495 442 SNP 1 A 1 G 80 12 15 G 80 12 ConsensusfromContig1187 333 214 SNP 1 T 2 T/G 60.0/40.0 9/6 15 T 60 9 G 40 6 ConsensusfromContig1954 332 279 SNP 1 A 1 T 86.7 13 15 T 86.66666667 13 ConsensusfromContig2237 34 34 SNP 1 C 1 A 86.7 13 15 A 86.66666667 13 ConsensusfromContig2570 399 351 SNP 1 T 1 C 86.7 13 15 C 86.66666667 13 ConsensusfromContig2645 104 96 SNP 1 C 2 C/G 53.3/46.7 8/7 15 C 53.33333333 8 G 46.66666667 7 ConsensusfromContig2653 240 188 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig2696 416 383 SNP 1 T 2 T/C 53.3/46.7 8/7 15 T 53.33333333 8 C 46.66666667 7 ConsensusfromContig2696 470 437 SNP 1 T 2 C/T 60.0/40.0 9/6 15 C 60 9 T 40 6 ConsensusfromContig2764 188 181 SNP 1 T 2 T/C 53.3/46.7 8/7 15 T 53.33333333 8 C 46.66666667 7 ConsensusfromContig2825 232 182 SNP 1 A 1 G 100 15 15 G 100 15 ConsensusfromContig3035 99 94 SNP 1 C 1 T 93.3 14 15 T 93.33333333 14 ConsensusfromContig3038 28 28 SNP 1 C 1 T 73.3 11 15 T 73.33333333 11 ConsensusfromContig3153 97 97 SNP 1 C 2 A/C 60.0/40.0 9/6 15 A 60 9 C 40 6 ConsensusfromContig3202 138 112 SNP 1 C 1 T 66.7 10 15 T 66.66666667 10 ConsensusfromContig3255 128 83 SNP 1 A 1 C 100 15 15 C 100 15 ConsensusfromContig3261 755 634 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig3373 177 80 SNP 1 G 2 A/G 60.0/40.0 9/6 15 A 60 9 G 40 6 ConsensusfromContig3530 342 236 SNP 1 G 1 A 100 15 15 A 100 15 ConsensusfromContig3814 148 78 SNP 1 G 1 C 80 12 15 C 80 12 ConsensusfromContig3814 151 81 SNP 1 G 1 A 73.3 11 15 A 73.33333333 11 ConsensusfromContig4049 359 174 SNP 1 G 2 T/G 53.3/46.7 8/7 15 T 53.33333333 8 G 46.66666667 7 ConsensusfromContig4294 155 151 SNP 1 T 1 C 100 15 15 C 100 15 ConsensusfromContig4467 199 181 SNP 1 A 2 A/G 53.3/46.7 8/7 15 A 53.33333333 8 G 46.66666667 7 ConsensusfromContig4513 122 122 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig4644 654 352 SNP 1 G 1 T 66.7 10 15 T 66.66666667 10 ConsensusfromContig4752 310 259 SNP 1 A 1 G 100 15 15 G 100 15 ConsensusfromContig4811 42 42 SNP 1 T 1 G 86.7 13 15 G 86.66666667 13 ConsensusfromContig4904 470 461 SNP 1 G 2 A/G 60.0/40.0 9/6 15 A 60 9 G 40 6 ConsensusfromContig4908 20 20 SNP 1 A 2 A/G 60.0/40.0 9/6 15 A 60 9 G 40 6 ConsensusfromContig4999 286 256 SNP 1 T 1 A 73.3 11 15 A 73.33333333 11 ConsensusfromContig5044 124 97 SNP 1 G 1 A 86.7 13 15 A 86.66666667 13 ConsensusfromContig5079 261 239 SNP 1 G 1 T 86.7 13 15 T 86.66666667 13 ConsensusfromContig5145 25 24 SNP 1 T 1 C 100 15 15 C 100 15 ConsensusfromContig5158 323 305 SNP 1 C 2 C/G 60.0/40.0 9/6 15 C 60 9 G 40 6 ConsensusfromContig5202 244 241 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig5294 739 592 SNP 1 T 2 T/A 60.0/40.0 9/6 15 T 60 9 A 40 6 ConsensusfromContig5362 357 350 SNP 1 G 1 T 86.7 13 15 T 86.66666667 13 ConsensusfromContig5617 64 56 SNP 1 T 1 G 80 12 15 G 80 12 ConsensusfromContig5829 300 296 SNP 1 G 2 G/T 53.3/46.7 8/7 15 G 53.33333333 8 T 46.66666667 7 ConsensusfromContig5874 268 239 SNP 1 A 1 T 100 15 15 T 100 15 ConsensusfromContig5894 243 228 SNP 1 A 1 C 73.3 11 15 C 73.33333333 11 ConsensusfromContig5901 97 97 SNP 1 C 2 T/C 60.0/40.0 9/6 15 T 60 9 C 40 6 ConsensusfromContig6116 168 157 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig6127 179 139 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig6176 71 68 SNP 1 G 1 A 73.3 11 15 A 73.33333333 11 ConsensusfromContig6237 250 67 SNP 1 T 1 C 100 15 15 C 100 15 ConsensusfromContig6329 249 195 SNP 1 A 1 C 93.3 14 15 C 93.33333333 14 ConsensusfromContig6392 215 169 SNP 1 G 1 A 93.3 14 15 A 93.33333333 14 ConsensusfromContig6497 9 5 SNP 1 G 1 A 86.7 13 15 A 86.66666667 13 ConsensusfromContig6903 100 99 SNP 1 C 1 G 73.3 11 15 G 73.33333333 11 ConsensusfromContig7113 444 303 SNP 1 A 1 T 80 12 15 T 80 12 ConsensusfromContig7179 97 78 SNP 1 A 2 A/C 53.3/46.7 8/7 15 A 53.33333333 8 C 46.66666667 7 ConsensusfromContig7192 185 56 SNP 1 G 1 C 66.7 10 15 C 66.66666667 10 ConsensusfromContig7278 58 47 SNP 1 G 2 G/T 53.3/46.7 8/7 15 G 53.33333333 8 T 46.66666667 7 ConsensusfromContig7299 232 231 SNP 1 T 1 C 93.3 14 15 C 93.33333333 14 ConsensusfromContig7370 208 208 SNP 1 T 2 T/A 53.3/46.7 8/7 15 T 53.33333333 8 A 46.66666667 7 ConsensusfromContig7375 378 225 SNP 1 A 1 G 100 15 15 G 100 15 ConsensusfromContig7507 583 561 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig7528 198 134 SNP 1 A 1 G 100 15 15 G 100 15 ConsensusfromContig8070 213 183 SNP 1 G 2 A/G 53.3/46.7 8/7 15 A 53.33333333 8 G 46.66666667 7 ConsensusfromContig8090 345 256 SNP 1 A 2 G/A 60.0/40.0 9/6 15 G 60 9 A 40 6 ConsensusfromContig8091 209 174 SNP 1 T 1 C 100 15 15 C 100 15 ConsensusfromContig8700 153 118 SNP 1 C 2 G/C 53.3/46.7 8/7 15 G 53.33333333 8 C 46.66666667 7 ConsensusfromContig8728 125 125 SNP 1 T 1 C 100 15 15 C 100 15 ConsensusfromContig9005 376 340 SNP 1 A 1 C 100 15 15 C 100 15 ConsensusfromContig9177 151 131 SNP 1 T 1 C 100 15 15 C 100 15 ConsensusfromContig9216 590 303 SNP 1 C 1 T 100 15 15 T 100 15 ConsensusfromContig9347 400 358 SNP 1 C 2 T/C 60.0/40.0 9/6 15 T 60 9 C 40 6 ConsensusfromContig118 59 47 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig118 69 57 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig382 125 111 SNP 1 A 2 A/G 50.0/50.0 8/8 16 A 50 8 G 50 8 ConsensusfromContig382 179 165 SNP 1 T 1 C 75 12 16 C 75 12 ConsensusfromContig468 20 18 SNP 1 C 2 C/G 62.5/37.5 10/6 16 C 62.5 10 G 37.5 6 ConsensusfromContig576 144 93 SNP 1 G 1 C 93.8 15 16 C 93.75 15 ConsensusfromContig929 146 145 SNP 1 A 1 T 100 16 16 T 100 16 ConsensusfromContig1118 257 249 SNP 1 C 2 T/C 62.5/37.5 10/6 16 T 62.5 10 C 37.5 6 ConsensusfromContig1193 163 151 SNP 1 T 1 A 81.2 13 16 A 81.25 13 ConsensusfromContig1203 319 251 SNP 1 T 2 C/T 50.0/50.0 8/8 16 C 50 8 T 50 8 ConsensusfromContig1569 295 282 SNP 1 A 2 A/T 62.5/37.5 10/6 16 A 62.5 10 T 37.5 6 ConsensusfromContig1696 188 158 SNP 1 T 2 T/C 62.5/37.5 10/6 16 T 62.5 10 C 37.5 6 ConsensusfromContig1759 112 74 SNP 1 C 1 A 68.8 11 16 A 68.75 11 ConsensusfromContig1787 640 231 SNP 1 G 1 A 87.5 14 16 A 87.5 14 ConsensusfromContig2305 127 109 SNP 1 A 2 A/G 50.0/50.0 8/8 16 A 50 8 G 50 8 ConsensusfromContig2387 95 95 SNP 1 A 1 C 81.2 13 16 C 81.25 13 ConsensusfromContig2408 280 254 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig2537 70 65 SNP 1 A 2 T/A 62.5/37.5 10/6 16 T 62.5 10 A 37.5 6 ConsensusfromContig2613 238 226 SNP 1 A 2 G/A 56.2/43.8 9/7 16 G 56.25 9 A 43.75 7 ConsensusfromContig2624 103 73 SNP 1 T 1 G 68.8 11 16 G 68.75 11 ConsensusfromContig2736 123 95 SNP 1 C 2 C/G 56.2/43.8 9/7 16 C 56.25 9 G 43.75 7 ConsensusfromContig2764 195 188 SNP 1 C 2 A/C 62.5/37.5 10/6 16 A 62.5 10 C 37.5 6 ConsensusfromContig2798 149 90 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig2798 390 331 SNP 1 C 2 C/A 62.5/37.5 10/6 16 C 62.5 10 A 37.5 6 ConsensusfromContig2843 151 138 SNP 1 A 2 A/G 62.5/37.5 10/6 16 A 62.5 10 G 37.5 6 ConsensusfromContig2987 45 45 SNP 1 G 2 G/A 62.5/37.5 10/6 16 G 62.5 10 A 37.5 6 ConsensusfromContig3158 30 30 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig3232 157 137 SNP 1 T 2 C/T 56.2/43.8 9/7 16 C 56.25 9 T 43.75 7 ConsensusfromContig3248 971 612 SNP 1 G 1 A 68.8 11 16 A 68.75 11 ConsensusfromContig3294 265 244 SNP 1 G 1 T 87.5 14 16 T 87.5 14 ConsensusfromContig3377 457 408 SNP 1 C 1 T 93.8 15 16 T 93.75 15 ConsensusfromContig3715 72 72 SNP 1 G 2 A/G 56.2/43.8 9/7 16 A 56.25 9 G 43.75 7 ConsensusfromContig3734 121 100 SNP 1 A 1 G 87.5 14 16 G 87.5 14 ConsensusfromContig3809 226 153 SNP 1 A 1 C 81.2 13 16 C 81.25 13 ConsensusfromContig4168 36 36 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig4229 662 566 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig4260 265 110 SNP 1 C 1 A 100 16 16 A 100 16 ConsensusfromContig4300 402 309 SNP 1 G 1 T 100 16 16 T 100 16 ConsensusfromContig4493 257 114 SNP 1 T 2 T/G 62.5/37.5 10/6 16 T 62.5 10 G 37.5 6 ConsensusfromContig4586 84 56 SNP 1 A 1 C 100 16 16 C 100 16 ConsensusfromContig4799 769 668 SNP 1 A 1 T 75 12 16 T 75 12 ConsensusfromContig4814 28 28 SNP 1 A 2 A/C 50.0/50.0 8/8 16 A 50 8 C 50 8 ConsensusfromContig5106 604 530 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig5122 147 113 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig5158 248 230 SNP 1 A 2 A/G 50.0/50.0 8/8 16 A 50 8 G 50 8 ConsensusfromContig5179 885 637 SNP 1 A 1 C 81.2 13 16 C 81.25 13 ConsensusfromContig5204 233 145 SNP 1 T 1 C 75 12 16 C 75 12 ConsensusfromContig5234 101 69 SNP 1 A 2 A/C 56.2/43.8 9/7 16 A 56.25 9 C 43.75 7 ConsensusfromContig5270 59 46 SNP 1 G 2 G/C 56.2/43.8 9/7 16 G 56.25 9 C 43.75 7 ConsensusfromContig5365 609 531 SNP 1 C 2 C/T 62.5/37.5 10/6 16 C 62.5 10 T 37.5 6 ConsensusfromContig5438 394 353 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig5622 341 295 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig6000 440 421 SNP 1 C 2 T/C 62.5/37.5 10/6 16 T 62.5 10 C 37.5 6 ConsensusfromContig6111 208 167 SNP 1 C 2 C/T 50.0/50.0 8/8 16 C 50 8 T 50 8 ConsensusfromContig6237 261 78 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig6283 255 224 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig6337 77 70 SNP 1 T 2 T/G 62.5/37.5 10/6 16 T 62.5 10 G 37.5 6 ConsensusfromContig6558 68 46 SNP 1 G 2 G/C 56.2/37.5 9/6 16 G 56.25 9 C 37.5 6 ConsensusfromContig6585 208 159 SNP 1 G 2 G/T 62.5/37.5 10/6 16 G 62.5 10 T 37.5 6 ConsensusfromContig6688 200 190 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig6709 319 204 SNP 1 T 1 C 68.8 11 16 C 68.75 11 ConsensusfromContig6714 646 490 SNP 1 T 2 C/T 62.5/37.5 10/6 16 C 62.5 10 T 37.5 6 ConsensusfromContig6842 99 93 SNP 1 A 2 C/A 62.5/37.5 10/6 16 C 62.5 10 A 37.5 6 ConsensusfromContig7023 276 142 SNP 1 C 1 A 100 16 16 A 100 16 ConsensusfromContig7119 488 361 SNP 1 C 2 A/C 56.2/43.8 9/7 16 A 56.25 9 C 43.75 7 ConsensusfromContig7147 222 127 SNP 1 G 2 G/A 56.2/43.8 9/7 16 G 56.25 9 A 43.75 7 ConsensusfromContig7480 239 239 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig7500 338 179 SNP 1 T 1 C 87.5 14 16 C 87.5 14 ConsensusfromContig7500 348 189 SNP 1 G 1 T 81.2 13 16 T 81.25 13 ConsensusfromContig7514 420 409 SNP 1 G 2 C/G 62.5/37.5 10/6 16 C 62.5 10 G 37.5 6 ConsensusfromContig7836 142 131 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig7853 331 263 SNP 1 A 2 G/A 62.5/37.5 10/6 16 G 62.5 10 A 37.5 6 ConsensusfromContig8175 730 684 SNP 1 A 1 G 100 16 16 G 100 16 ConsensusfromContig8482 331 274 SNP 1 G 2 A/G 50.0/50.0 8/8 16 A 50 8 G 50 8 ConsensusfromContig8496 271 140 SNP 1 A 2 A/G 50.0/50.0 8/8 16 A 50 8 G 50 8 ConsensusfromContig8589 172 166 SNP 1 T 2 C/T 50.0/50.0 8/8 16 C 50 8 T 50 8 ConsensusfromContig8619 294 177 SNP 1 G 2 G/C 56.2/43.8 9/7 16 G 56.25 9 C 43.75 7 ConsensusfromContig8682 127 127 SNP 1 C 1 A 100 16 16 A 100 16 ConsensusfromContig8686 90 53 SNP 1 A 1 T 93.8 15 16 T 93.75 15 ConsensusfromContig9014 145 137 SNP 1 G 2 A/G 56.2/43.8 9/7 16 A 56.25 9 G 43.75 7 ConsensusfromContig9172 592 560 SNP 1 G 1 A 100 16 16 A 100 16 ConsensusfromContig9296 94 94 SNP 1 C 1 T 100 16 16 T 100 16 ConsensusfromContig101 135 132 SNP 1 A 1 G 100 17 17 G 100 17 ConsensusfromContig350 29 29 SNP 1 T 2 C/T 52.9/47.1 9/8 17 C 52.94117647 9 T 47.05882353 8 ConsensusfromContig602 273 264 SNP 1 T 2 T/C 64.7/35.3 11/6 17 T 64.70588235 11 C 35.29411765 6 ConsensusfromContig779 103 35 SNP 1 T 1 C 88.2 15 17 C 88.23529412 15 ConsensusfromContig786 182 126 SNP 1 T 2 T/C 58.8/41.2 10/7 17 T 58.82352941 10 C 41.17647059 7 ConsensusfromContig1182 222 172 SNP 1 G 2 T/G 58.8/41.2 10/7 17 T 58.82352941 10 G 41.17647059 7 ConsensusfromContig1557 322 243 SNP 1 T 2 A/T 64.7/35.3 11/6 17 A 64.70588235 11 T 35.29411765 6 ConsensusfromContig1591 222 215 SNP 1 A 2 G/A 64.7/35.3 11/6 17 G 64.70588235 11 A 35.29411765 6 ConsensusfromContig1734 154 148 SNP 1 C 2 C/T 58.8/41.2 10/7 17 C 58.82352941 10 T 41.17647059 7 ConsensusfromContig1957 53 53 SNP 1 A 2 G/A 64.7/35.3 11/6 17 G 64.70588235 11 A 35.29411765 6 ConsensusfromContig1998 585 500 SNP 1 C 1 T 94.1 16 17 T 94.11764706 16 ConsensusfromContig2119 221 42 SNP 1 C 2 T/C 52.9/47.1 9/8 17 T 52.94117647 9 C 47.05882353 8 ConsensusfromContig2156 466 423 SNP 1 A 1 G 100 17 17 G 100 17 ConsensusfromContig2313 279 236 SNP 1 C 2 C/T 64.7/35.3 11/6 17 C 64.70588235 11 T 35.29411765 6 ConsensusfromContig2466 276 263 SNP 1 A 1 C 94.1 16 17 C 94.11764706 16 ConsensusfromContig2479 90 84 SNP 1 T 2 A/T 52.9/47.1 9/8 17 A 52.94117647 9 T 47.05882353 8 ConsensusfromContig2562 778 711 SNP 1 T 1 C 100 17 17 C 100 17 ConsensusfromContig2696 458 425 SNP 1 G 2 T/G 52.9/47.1 9/8 17 T 52.94117647 9 G 47.05882353 8 ConsensusfromContig2788 144 137 SNP 1 A 2 C/A 47.1/35.3 8/6 17 C 47.05882353 8 A 35.29411765 6 ConsensusfromContig2788 150 143 SNP 1 C 2 C/T 58.8/41.2 10/7 17 C 58.82352941 10 T 41.17647059 7 ConsensusfromContig2852 195 173 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig2857 222 178 SNP 1 G 2 A/G 58.8/41.2 10/7 17 A 58.82352941 10 G 41.17647059 7 ConsensusfromContig3110 237 201 SNP 1 A 2 A/G 52.9/47.1 9/8 17 A 52.94117647 9 G 47.05882353 8 ConsensusfromContig3110 370 334 SNP 1 T 2 C/T 64.7/35.3 11/6 17 C 64.70588235 11 T 35.29411765 6 ConsensusfromContig3341 455 172 SNP 1 G 2 G/A 64.7/35.3 11/6 17 G 64.70588235 11 A 35.29411765 6 ConsensusfromContig3361 418 398 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig3522 427 264 SNP 1 T 1 G 100 17 17 G 100 17 ConsensusfromContig3572 286 196 SNP 1 T 1 A 100 17 17 A 100 17 ConsensusfromContig4009 166 136 SNP 1 A 1 G 100 17 17 G 100 17 ConsensusfromContig4025 22 13 SNP 1 C 1 T 82.4 14 17 T 82.35294118 14 ConsensusfromContig4644 39 22 SNP 1 T 2 T/C 52.9/47.1 9/8 17 T 52.94117647 9 C 47.05882353 8 ConsensusfromContig4764 83 65 SNP 1 T 1 C 94.1 16 17 C 94.11764706 16 ConsensusfromContig4828 290 242 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig4898 341 341 SNP 1 C 2 C/A 64.7/35.3 11/6 17 C 64.70588235 11 A 35.29411765 6 ConsensusfromContig4966 14 5 SNP 1 T 1 C 88.2 15 17 C 88.23529412 15 ConsensusfromContig5172 319 272 SNP 1 A 2 G/A 52.9/47.1 9/8 17 G 52.94117647 9 A 47.05882353 8 ConsensusfromContig5179 874 626 SNP 1 G 1 C 70.6 12 17 C 70.58823529 12 ConsensusfromContig5180 60 42 SNP 1 C 2 C/G 64.7/35.3 11/6 17 C 64.70588235 11 G 35.29411765 6 ConsensusfromContig5205 646 640 SNP 1 A 1 C 100 17 17 C 100 17 ConsensusfromContig5386 740 611 SNP 1 T 2 T/C 58.8/41.2 10/7 17 T 58.82352941 10 C 41.17647059 7 ConsensusfromContig5477 110 95 SNP 1 T 2 T/G 64.7/35.3 11/6 17 T 64.70588235 11 G 35.29411765 6 ConsensusfromContig5758 208 204 SNP 1 A 2 A/G 64.7/35.3 11/6 17 A 64.70588235 11 G 35.29411765 6 ConsensusfromContig5821 290 21 SNP 1 T 1 C 100 17 17 C 100 17 ConsensusfromContig6097 146 136 SNP 1 G 2 G/T 64.7/35.3 11/6 17 G 64.70588235 11 T 35.29411765 6 ConsensusfromContig6100 596 298 SNP 1 C 2 C/T 64.7/35.3 11/6 17 C 64.70588235 11 T 35.29411765 6 ConsensusfromContig6132 333 314 SNP 1 T 2 C/T 58.8/35.3 10/6 17 C 58.82352941 10 T 35.29411765 6 ConsensusfromContig6159 188 64 SNP 1 G 2 G/T 52.9/47.1 9/8 17 G 52.94117647 9 T 47.05882353 8 ConsensusfromContig6210 234 206 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig6329 172 118 SNP 1 G 2 G/A 52.9/47.1 9/8 17 G 52.94117647 9 A 47.05882353 8 ConsensusfromContig6331 643 500 SNP 1 T 2 A/T 52.9/47.1 9/8 17 A 52.94117647 9 T 47.05882353 8 ConsensusfromContig6385 107 107 SNP 1 A 1 G 70.6 12 17 G 70.58823529 12 ConsensusfromContig6446 180 180 SNP 1 C 2 G/C 64.7/35.3 11/6 17 G 64.70588235 11 C 35.29411765 6 ConsensusfromContig6498 95 88 SNP 1 G 1 A 100 17 17 A 100 17 ConsensusfromContig6618 351 318 SNP 1 A 1 C 100 17 17 C 100 17 ConsensusfromContig6643 50 50 SNP 1 T 2 C/T 64.7/35.3 11/6 17 C 64.70588235 11 T 35.29411765 6 ConsensusfromContig6704 58 40 SNP 1 T 2 C/T 58.8/41.2 10/7 17 C 58.82352941 10 T 41.17647059 7 ConsensusfromContig6868 331 137 SNP 1 A 1 G 58.8 10 17 G 58.82352941 10 ConsensusfromContig6898 111 111 SNP 1 C 1 A 76.5 13 17 A 76.47058824 13 ConsensusfromContig6898 114 114 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig7145 161 161 SNP 1 G 2 T/G 52.9/47.1 9/8 17 T 52.94117647 9 G 47.05882353 8 ConsensusfromContig7147 220 125 SNP 1 A 2 A/T 58.8/41.2 10/7 17 A 58.82352941 10 T 41.17647059 7 ConsensusfromContig7192 220 91 SNP 1 T 1 C 100 17 17 C 100 17 ConsensusfromContig7272 195 128 SNP 1 T 2 T/C 64.7/35.3 11/6 17 T 64.70588235 11 C 35.29411765 6 ConsensusfromContig7591 455 432 SNP 1 G 1 A 100 17 17 A 100 17 ConsensusfromContig7740 484 399 SNP 1 A 2 A/G 64.7/35.3 11/6 17 A 64.70588235 11 G 35.29411765 6 ConsensusfromContig8011 849 773 SNP 1 A 2 A/T 58.8/41.2 10/7 17 A 58.82352941 10 T 41.17647059 7 ConsensusfromContig8011 864 788 SNP 1 C 2 T/C 58.8/41.2 10/7 17 T 58.82352941 10 C 41.17647059 7 ConsensusfromContig8011 947 871 SNP 1 C 2 T/C 52.9/47.1 9/8 17 T 52.94117647 9 C 47.05882353 8 ConsensusfromContig8075 543 375 SNP 1 G 2 G/A 58.8/41.2 10/7 17 G 58.82352941 10 A 41.17647059 7 ConsensusfromContig8184 316 292 SNP 1 G 1 A 76.5 13 17 A 76.47058824 13 ConsensusfromContig8201 21 21 SNP 1 A 2 G/A 58.8/41.2 10/7 17 G 58.82352941 10 A 41.17647059 7 ConsensusfromContig8201 173 155 SNP 1 A 1 G 100 17 17 G 100 17 ConsensusfromContig8208 407 387 SNP 1 A 1 G 82.4 14 17 G 82.35294118 14 ConsensusfromContig8678 94 61 SNP 1 T 2 T/C 52.9/47.1 9/8 17 T 52.94117647 9 C 47.05882353 8 ConsensusfromContig8746 374 243 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig8789 372 322 SNP 1 A 1 C 100 17 17 C 100 17 ConsensusfromContig8797 473 381 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig8904 37 9 SNP 1 A 2 A/C 64.7/35.3 11/6 17 A 64.70588235 11 C 35.29411765 6 ConsensusfromContig9002 439 350 SNP 1 G 2 G/A 58.8/41.2 10/7 17 G 58.82352941 10 A 41.17647059 7 ConsensusfromContig9005 353 317 SNP 1 C 1 T 100 17 17 T 100 17 ConsensusfromContig9336 536 478 SNP 1 G 2 G/A 64.7/35.3 11/6 17 G 64.70588235 11 A 35.29411765 6 ConsensusfromContig9347 402 360 SNP 1 T 2 T/G 52.9/47.1 9/8 17 T 52.94117647 9 G 47.05882353 8 ConsensusfromContig91 229 225 SNP 1 A 2 A/C 55.6/44.4 10/8 18 A 55.55555556 10 C 44.44444444 8 ConsensusfromContig139 138 138 SNP 1 A 1 G 100 18 18 G 100 18 ConsensusfromContig380 274 166 SNP 1 G 2 A/G 55.6/44.4 10/8 18 A 55.55555556 10 G 44.44444444 8 ConsensusfromContig820 66 66 SNP 1 T 2 A/T 50.0/50.0 9/9 18 A 50 9 T 50 9 ConsensusfromContig1145 201 96 SNP 1 C 1 G 66.7 12 18 G 66.66666667 12 ConsensusfromContig1451 538 491 SNP 1 T 1 C 77.8 14 18 C 77.77777778 14 ConsensusfromContig1525 388 335 SNP 1 C 2 G/C 55.6/44.4 10/8 18 G 55.55555556 10 C 44.44444444 8 ConsensusfromContig1730 330 255 SNP 1 T 1 A 100 18 18 A 100 18 ConsensusfromContig1783 34 12 SNP 1 G 1 A 100 18 18 A 100 18 ConsensusfromContig1852 481 353 SNP 1 T 2 C/T 61.1/38.9 11/7 18 C 61.11111111 11 T 38.88888889 7 ConsensusfromContig1942 353 243 SNP 1 T 1 G 100 18 18 G 100 18 ConsensusfromContig1948 277 275 SNP 1 T 1 C 100 18 18 C 100 18 ConsensusfromContig2006 862 794 SNP 1 T 1 C 100 18 18 C 100 18 ConsensusfromContig2131 419 339 SNP 1 G 2 G/T 50.0/50.0 9/9 18 G 50 9 T 50 9 ConsensusfromContig2508 277 277 SNP 1 A 1 T 83.3 15 18 T 83.33333333 15 ConsensusfromContig2576 362 282 SNP 1 G 2 G/T 50.0/50.0 9/9 18 G 50 9 T 50 9 ConsensusfromContig2617 388 333 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig2618 103 103 SNP 1 C 2 T/C 61.1/38.9 11/7 18 T 61.11111111 11 C 38.88888889 7 ConsensusfromContig3110 407 371 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig3313 1223 698 SNP 1 T 1 A 72.2 13 18 A 72.22222222 13 ConsensusfromContig3341 418 135 SNP 1 A 1 T 72.2 13 18 T 72.22222222 13 ConsensusfromContig3483 283 282 SNP 1 A 1 G 100 18 18 G 100 18 ConsensusfromContig3707 89 89 SNP 1 N 1 A 100 18 18 A 100 18 ConsensusfromContig3785 630 563 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig3865 143 123 SNP 1 G 1 A 100 18 18 A 100 18 ConsensusfromContig4410 235 188 SNP 1 A 2 A/G 50.0/50.0 9/9 18 A 50 9 G 50 9 ConsensusfromContig4814 21 21 SNP 1 C 2 C/A 55.6/44.4 10/8 18 C 55.55555556 10 A 44.44444444 8 ConsensusfromContig4814 220 220 SNP 1 C 2 C/T 61.1/38.9 11/7 18 C 61.11111111 11 T 38.88888889 7 ConsensusfromContig4904 344 337 SNP 1 T 2 A/T 61.1/38.9 11/7 18 A 61.11111111 11 T 38.88888889 7 ConsensusfromContig5091 170 140 SNP 1 C 1 A 94.4 17 18 A 94.44444444 17 ConsensusfromContig5119 287 250 SNP 1 C 2 C/T 55.6/44.4 10/8 18 C 55.55555556 10 T 44.44444444 8 ConsensusfromContig5205 198 192 SNP 1 A 1 G 100 18 18 G 100 18 ConsensusfromContig5311 206 206 SNP 1 T 2 A/T 61.1/38.9 11/7 18 A 61.11111111 11 T 38.88888889 7 ConsensusfromContig5362 448 441 SNP 1 T 2 C/T 61.1/38.9 11/7 18 C 61.11111111 11 T 38.88888889 7 ConsensusfromContig5438 343 302 SNP 1 G 2 T/G 55.6/44.4 10/8 18 T 55.55555556 10 G 44.44444444 8 ConsensusfromContig5451 77 52 SNP 1 C 1 T 66.7 12 18 T 66.66666667 12 ConsensusfromContig5557 401 248 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig5894 213 198 SNP 1 G 2 G/A 61.1/38.9 11/7 18 G 61.11111111 11 A 38.88888889 7 ConsensusfromContig5943 70 70 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig6100 601 303 SNP 1 C 1 T 77.8 14 18 T 77.77777778 14 ConsensusfromContig6631 232 105 SNP 1 C 2 C/T 61.1/38.9 11/7 18 C 61.11111111 11 T 38.88888889 7 ConsensusfromContig6760 435 400 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig7051 430 368 SNP 1 A 2 A/C 55.6/44.4 10/8 18 A 55.55555556 10 C 44.44444444 8 ConsensusfromContig7095 233 191 SNP 1 G 2 G/A 50.0/38.9 9/7 18 G 50 9 A 38.88888889 7 ConsensusfromContig7100 568 496 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig7810 377 365 SNP 1 T 1 C 100 18 18 C 100 18 ConsensusfromContig7811 527 401 SNP 1 T 1 C 83.3 15 18 C 83.33333333 15 ConsensusfromContig8215 123 105 SNP 1 G 1 C 94.4 17 18 C 94.44444444 17 ConsensusfromContig8391 493 419 SNP 1 C 1 G 100 18 18 G 100 18 ConsensusfromContig8403 764 644 SNP 1 C 1 T 94.4 17 18 T 94.44444444 17 ConsensusfromContig8403 771 651 SNP 1 G 1 A 88.9 16 18 A 88.88888889 16 ConsensusfromContig8736 207 183 SNP 1 T 1 A 72.2 13 18 A 72.22222222 13 ConsensusfromContig8870 280 67 SNP 1 G 2 G/T 61.1/38.9 11/7 18 G 61.11111111 11 T 38.88888889 7 ConsensusfromContig8890 269 267 SNP 1 C 1 T 100 18 18 T 100 18 ConsensusfromContig8895 227 227 SNP 1 T 2 T/C 61.1/38.9 11/7 18 T 61.11111111 11 C 38.88888889 7 ConsensusfromContig9002 147 62 SNP 1 C 1 A 72.2 13 18 A 72.22222222 13 ConsensusfromContig270 437 404 SNP 1 A 1 G 73.7 14 19 G 73.68421053 14 ConsensusfromContig380 277 169 SNP 1 A 2 G/A 52.6/47.4 10/9 19 G 52.63157895 10 A 47.36842105 9 ConsensusfromContig382 65 51 SNP 1 G 1 T 78.9 15 19 T 78.94736842 15 ConsensusfromContig665 26 21 SNP 1 T 1 C 84.2 16 19 C 84.21052632 16 ConsensusfromContig1647 133 132 SNP 1 C 2 C/T 63.2/36.8 12/7 19 C 63.15789474 12 T 36.84210526 7 ConsensusfromContig1873 328 284 SNP 1 A 1 T 100 19 19 T 100 19 ConsensusfromContig2156 302 259 SNP 1 T 2 T/A 52.6/47.4 10/9 19 T 52.63157895 10 A 47.36842105 9 ConsensusfromContig2305 307 289 SNP 1 A 1 G 89.5 17 19 G 89.47368421 17 ConsensusfromContig2508 240 240 SNP 1 A 2 A/C 52.6/47.4 10/9 19 A 52.63157895 10 C 47.36842105 9 ConsensusfromContig2624 101 71 SNP 1 T 2 C/T 57.9/42.1 11/8 19 C 57.89473684 11 T 42.10526316 8 ConsensusfromContig2668 78 39 SNP 1 A 1 G 100 19 19 G 100 19 ConsensusfromContig2717 115 110 SNP 1 T 1 A 100 19 19 A 100 19 ConsensusfromContig3085 248 196 SNP 1 C 1 T 100 19 19 T 100 19 ConsensusfromContig3107 340 289 SNP 1 T 1 C 73.7 14 19 C 73.68421053 14 ConsensusfromContig3130 115 115 SNP 1 A 1 C 100 19 19 C 100 19 ConsensusfromContig3232 147 127 SNP 1 C 2 G/C 52.6/47.4 10/9 19 G 52.63157895 10 C 47.36842105 9 ConsensusfromContig3341 456 173 SNP 1 A 1 G 78.9 15 19 G 78.94736842 15 ConsensusfromContig3360 166 166 SNP 1 A 2 G/A 52.6/47.4 10/9 19 G 52.63157895 10 A 47.36842105 9 ConsensusfromContig3486 266 266 SNP 1 C 2 C/G 52.6/47.4 10/9 19 C 52.63157895 10 G 47.36842105 9 ConsensusfromContig3958 231 231 SNP 1 C 1 T 78.9 15 19 T 78.94736842 15 ConsensusfromContig4187 43 14 SNP 1 A 1 G 100 19 19 G 100 19 ConsensusfromContig4410 240 193 SNP 1 A 2 A/G 57.9/42.1 11/8 19 A 57.89473684 11 G 42.10526316 8 ConsensusfromContig4560 272 262 SNP 1 A 1 G 68.4 13 19 G 68.42105263 13 ConsensusfromContig4638 259 186 SNP 1 T 2 T/A 57.9/42.1 11/8 19 T 57.89473684 11 A 42.10526316 8 ConsensusfromContig4828 396 348 SNP 1 A 1 G 100 19 19 G 100 19 ConsensusfromContig5131 305 248 SNP 1 G 2 T/G 57.9/36.8 11/7 19 T 57.89473684 11 G 36.84210526 7 ConsensusfromContig5263 462 413 SNP 1 A 1 T 100 19 19 T 100 19 ConsensusfromContig5274 269 244 SNP 1 C 2 C/G 57.9/42.1 11/8 19 C 57.89473684 11 G 42.10526316 8 ConsensusfromContig5287 138 138 SNP 1 A 2 G/A 52.6/47.4 10/9 19 G 52.63157895 10 A 47.36842105 9 ConsensusfromContig5477 434 393 SNP 1 C 2 A/C 57.9/42.1 11/8 19 A 57.89473684 11 C 42.10526316 8 ConsensusfromContig5485 489 388 SNP 1 G 1 A 73.7 14 19 A 73.68421053 14 ConsensusfromContig5490 230 126 SNP 1 G 2 G/C 57.9/42.1 11/8 19 G 57.89473684 11 C 42.10526316 8 ConsensusfromContig5991 142 142 SNP 1 T 1 C 73.7 14 19 C 73.68421053 14 ConsensusfromContig6168 40 40 SNP 1 T 1 G 73.7 14 19 G 73.68421053 14 ConsensusfromContig6228 52 52 SNP 1 A 2 A/G 63.2/36.8 12/7 19 A 63.15789474 12 G 36.84210526 7 ConsensusfromContig6257 403 317 SNP 1 T 2 T/A 63.2/36.8 12/7 19 T 63.15789474 12 A 36.84210526 7 ConsensusfromContig6339 145 114 SNP 1 C 2 C/G 63.2/36.8 12/7 19 C 63.15789474 12 G 36.84210526 7 ConsensusfromContig6364 382 376 SNP 1 C 1 T 94.7 18 19 T 94.73684211 18 ConsensusfromContig6369 160 85 SNP 1 G 1 A 89.5 17 19 A 89.47368421 17 ConsensusfromContig6382 38 32 SNP 1 T 2 C/T 63.2/36.8 12/7 19 C 63.15789474 12 T 36.84210526 7 ConsensusfromContig6515 288 229 SNP 1 C 1 T 100 19 19 T 100 19 ConsensusfromContig6657 297 246 SNP 1 C 1 T 100 19 19 T 100 19 ConsensusfromContig6824 27 15 SNP 1 T 1 A 94.7 18 19 A 94.73684211 18 ConsensusfromContig7096 87 49 SNP 1 T 1 C 94.7 18 19 C 94.73684211 18 ConsensusfromContig7466 68 68 SNP 1 T 1 G 78.9 15 19 G 78.94736842 15 ConsensusfromContig7482 371 305 SNP 1 C 1 T 100 19 19 T 100 19 ConsensusfromContig7757 275 250 SNP 1 A 1 G 100 19 19 G 100 19 ConsensusfromContig8090 207 118 SNP 1 A 2 A/G 52.6/47.4 10/9 19 A 52.63157895 10 G 47.36842105 9 ConsensusfromContig8194 513 396 SNP 1 A 2 A/C 63.2/36.8 12/7 19 A 63.15789474 12 C 36.84210526 7 ConsensusfromContig8789 375 325 SNP 1 C 1 T 100 19 19 T 100 19 ConsensusfromContig8795 76 22 SNP 1 T 1 C 100 19 19 C 100 19 ConsensusfromContig8858 299 164 SNP 1 C 2 T/C 63.2/36.8 12/7 19 T 63.15789474 12 C 36.84210526 7 ConsensusfromContig8870 293 80 SNP 1 A 2 G/A 52.6/47.4 10/9 19 G 52.63157895 10 A 47.36842105 9 ConsensusfromContig8937 39 37 SNP 1 A 1 G 100 19 19 G 100 19 ConsensusfromContig202 235 222 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig336 228 191 SNP 1 A 2 A/T 55.0/45.0 11/9 20 A 55 11 T 45 9 ConsensusfromContig467 255 255 SNP 1 A 1 C 95 19 20 C 95 19 ConsensusfromContig520 187 126 SNP 1 G 2 G/A 65.0/35.0 13/7 20 G 65 13 A 35 7 ConsensusfromContig768 326 299 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig943 88 35 SNP 1 G 1 C 100 20 20 C 100 20 ConsensusfromContig1137 191 104 SNP 1 T 1 G 75 15 20 G 75 15 ConsensusfromContig1141 226 180 SNP 1 G 1 A 100 20 20 A 100 20 ConsensusfromContig1192 143 99 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig1529 143 121 SNP 1 C 1 G 90 18 20 G 90 18 ConsensusfromContig1647 401 400 SNP 1 T 1 C 85 17 20 C 85 17 ConsensusfromContig1976 417 393 SNP 1 T 1 C 75 15 20 C 75 15 ConsensusfromContig2006 782 714 SNP 1 T 1 C 100 20 20 C 100 20 ConsensusfromContig2107 189 84 SNP 1 A 1 T 95 19 20 T 95 19 ConsensusfromContig2119 416 213 SNP 1 A 1 G 100 20 20 G 100 20 ConsensusfromContig2438 511 130 SNP 1 T 1 G 80 16 20 G 80 16 ConsensusfromContig2483 225 209 SNP 1 T 2 T/C 65.0/35.0 13/7 20 T 65 13 C 35 7 ConsensusfromContig3107 343 292 SNP 1 T 1 C 75 15 20 C 75 15 ConsensusfromContig3328 157 119 SNP 1 A 1 T 90 18 20 T 90 18 ConsensusfromContig3385 264 227 SNP 1 G 2 A/G 60.0/40.0 12/8 20 A 60 12 G 40 8 ConsensusfromContig3394 27 27 SNP 1 T 2 T/A 65.0/35.0 13/7 20 T 65 13 A 35 7 ConsensusfromContig3666 407 282 SNP 1 A 2 A/G 50.0/50.0 10/10 20 A 50 10 G 50 10 ConsensusfromContig4054 63 58 SNP 1 A 1 G 100 20 20 G 100 20 ConsensusfromContig4066 466 411 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig4433 104 83 SNP 1 A 1 G 85 17 20 G 85 17 ConsensusfromContig4444 74 54 SNP 1 C 1 T 90 18 20 T 90 18 ConsensusfromContig4644 745 443 SNP 1 C 2 C/T 65.0/35.0 13/7 20 C 65 13 T 35 7 ConsensusfromContig4937 98 88 SNP 1 G 2 G/T 55.0/45.0 11/9 20 G 55 11 T 45 9 ConsensusfromContig5145 120 119 SNP 1 A 1 T 95 19 20 T 95 19 ConsensusfromContig5983 425 363 SNP 1 T 2 T/C 60.0/35.0 12/7 20 T 60 12 C 35 7 ConsensusfromContig6099 580 454 SNP 1 C 2 C/G 50.0/50.0 10/10 20 C 50 10 G 50 10 ConsensusfromContig6155 208 141 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig6210 63 50 SNP 1 T 2 T/C 55.0/45.0 11/9 20 T 55 11 C 45 9 ConsensusfromContig6214 262 252 SNP 1 T 1 C 80 16 20 C 80 16 ConsensusfromContig6215 102 102 SNP 1 G 1 T 100 20 20 T 100 20 ConsensusfromContig6263 311 310 SNP 1 C 2 C/T 50.0/50.0 10/10 20 C 50 10 T 50 10 ConsensusfromContig6435 176 176 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig7051 833 770 SNP 1 C 2 C/G 60.0/40.0 12/8 20 C 60 12 G 40 8 ConsensusfromContig7100 160 153 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig7110 456 361 SNP 1 T 2 C/T 65.0/35.0 13/7 20 C 65 13 T 35 7 ConsensusfromContig7111 342 305 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig7278 104 93 SNP 1 G 2 A/G 55.0/45.0 11/9 20 A 55 11 G 45 9 ConsensusfromContig7716 128 128 SNP 1 G 2 A/G 60.0/40.0 12/8 20 A 60 12 G 40 8 ConsensusfromContig7989 218 181 SNP 1 A 2 A/T 60.0/40.0 12/8 20 A 60 12 T 40 8 ConsensusfromContig8011 944 868 SNP 1 A 2 A/G 50.0/50.0 10/10 20 A 50 10 G 50 10 ConsensusfromContig8155 276 100 SNP 1 G 1 A 100 20 20 A 100 20 ConsensusfromContig8215 121 103 SNP 1 T 1 C 95 19 20 C 95 19 ConsensusfromContig8620 222 191 SNP 1 C 2 T/C 60.0/40.0 12/8 20 T 60 12 C 40 8 ConsensusfromContig8895 182 182 SNP 1 A 1 G 90 18 20 G 90 18 ConsensusfromContig9022 266 158 SNP 1 A 2 A/G 60.0/40.0 12/8 20 A 60 12 G 40 8 ConsensusfromContig9050 90 79 SNP 1 C 1 T 100 20 20 T 100 20 ConsensusfromContig9177 352 322 SNP 1 G 1 A 85 17 20 A 85 17 ConsensusfromContig9262 582 506 SNP 1 T 2 T/G 65.0/35.0 13/7 20 T 65 13 G 35 7 ConsensusfromContig266 55 50 SNP 1 C 1 A 71.4 15 21 A 71.42857143 15 ConsensusfromContig266 225 220 SNP 1 T 2 C/T 61.9/38.1 13/8 21 C 61.9047619 13 T 38.0952381 8 ConsensusfromContig460 373 349 SNP 1 T 1 C 81 17 21 C 80.95238095 17 ConsensusfromContig861 434 334 SNP 1 C 1 T 100 21 21 T 100 21 ConsensusfromContig1319 530 505 SNP 1 T 2 T/G 52.4/47.6 11/10 21 T 52.38095238 11 G 47.61904762 10 ConsensusfromContig1388 190 131 SNP 1 G 1 A 95.2 20 21 A 95.23809524 20 ConsensusfromContig1417 648 298 SNP 1 C 1 T 95.2 20 21 T 95.23809524 20 ConsensusfromContig1714 569 565 SNP 1 A 1 C 71.4 15 21 C 71.42857143 15 ConsensusfromContig2136 141 133 SNP 1 T 1 C 100 21 21 C 100 21 ConsensusfromContig2177 442 422 SNP 1 A 1 C 95.2 20 21 C 95.23809524 20 ConsensusfromContig2641 753 593 SNP 1 G 1 A 71.4 15 21 A 71.42857143 15 ConsensusfromContig3266 101 72 SNP 1 T 2 T/C 61.9/38.1 13/8 21 T 61.9047619 13 C 38.0952381 8 ConsensusfromContig3278 46 46 SNP 1 C 2 T/C 52.4/47.6 11/10 21 T 52.38095238 11 C 47.61904762 10 ConsensusfromContig3313 978 498 SNP 1 C 1 A 95.2 20 21 A 95.23809524 20 ConsensusfromContig3529 162 162 SNP 1 C 1 T 100 21 21 T 100 21 ConsensusfromContig3985 246 168 SNP 1 T 1 A 71.4 15 21 A 71.42857143 15 ConsensusfromContig4028 166 161 SNP 1 T 2 G/T 57.1/42.9 12/9 21 G 57.14285714 12 T 42.85714286 9 ConsensusfromContig4484 140 107 SNP 1 A 1 G 81 17 21 G 80.95238095 17 ConsensusfromContig4522 159 106 SNP 1 G 1 A 100 21 21 A 100 21 ConsensusfromContig4830 177 152 SNP 1 A 1 G 100 21 21 G 100 21 ConsensusfromContig4871 487 393 SNP 1 A 1 G 100 21 21 G 100 21 ConsensusfromContig5091 556 519 SNP 1 C 2 T/C 52.4/47.6 11/10 21 T 52.38095238 11 C 47.61904762 10 ConsensusfromContig5171 194 129 SNP 1 A 2 A/C 52.4/47.6 11/10 21 A 52.38095238 11 C 47.61904762 10 ConsensusfromContig5172 218 171 SNP 1 C 1 G 66.7 14 21 G 66.66666667 14 ConsensusfromContig5201 325 186 SNP 1 A 1 C 66.7 14 21 C 66.66666667 14 ConsensusfromContig5202 47 44 SNP 1 C 1 T 100 21 21 T 100 21 ConsensusfromContig5612 108 108 SNP 1 A 2 C/A 52.4/47.6 11/10 21 C 52.38095238 11 A 47.61904762 10 ConsensusfromContig5636 341 341 SNP 1 G 2 G/C 52.4/47.6 11/10 21 G 52.38095238 11 C 47.61904762 10 ConsensusfromContig6082 310 207 SNP 1 C 1 T 90.5 19 21 T 90.47619048 19 ConsensusfromContig6364 87 84 SNP 1 T 1 C 100 21 21 C 100 21 ConsensusfromContig6406 27 27 SNP 1 N 1 A 100 21 21 A 100 21 ConsensusfromContig6546 227 177 SNP 1 C 2 C/T 52.4/47.6 11/10 21 C 52.38095238 11 T 47.61904762 10 ConsensusfromContig6681 330 301 SNP 1 T 2 T/C 52.4/47.6 11/10 21 T 52.38095238 11 C 47.61904762 10 ConsensusfromContig7110 384 289 SNP 1 T 2 T/C 61.9/38.1 13/8 21 T 61.9047619 13 C 38.0952381 8 ConsensusfromContig7370 244 244 SNP 1 A 2 C/A 52.4/47.6 11/10 21 C 52.38095238 11 A 47.61904762 10 ConsensusfromContig7415 145 89 SNP 1 T 2 T/C 61.9/38.1 13/8 21 T 61.9047619 13 C 38.0952381 8 ConsensusfromContig8011 855 779 SNP 1 A 2 A/G 52.4/47.6 11/10 21 A 52.38095238 11 G 47.61904762 10 ConsensusfromContig8097 243 241 SNP 1 C 1 T 100 21 21 T 100 21 ConsensusfromContig8159 323 317 SNP 1 G 1 A 100 21 21 A 100 21 ConsensusfromContig8745 291 270 SNP 1 A 1 G 100 21 21 G 100 21 ConsensusfromContig8948 279 279 SNP 1 T 1 G 100 21 21 G 100 21 ConsensusfromContig9177 367 337 SNP 1 G 1 A 85.7 18 21 A 85.71428571 18 ConsensusfromContig9189 166 148 SNP 1 C 1 T 100 21 21 T 100 21 ConsensusfromContig434 375 310 SNP 1 C 2 C/T 59.1/40.9 13/9 22 C 59.09090909 13 T 40.90909091 9 ConsensusfromContig538 269 217 SNP 1 T 1 G 100 22 22 G 100 22 ConsensusfromContig665 23 18 SNP 1 T 1 C 95.5 21 22 C 95.45454545 21 ConsensusfromContig793 155 78 SNP 1 A 2 C/A 59.1/40.9 13/9 22 C 59.09090909 13 A 40.90909091 9 ConsensusfromContig820 193 193 SNP 1 A 1 G 100 22 22 G 100 22 ConsensusfromContig1059 375 147 SNP 1 G 2 G/T 54.5/45.5 12/10 22 G 54.54545455 12 T 45.45454545 10 ConsensusfromContig1193 298 286 SNP 1 T 1 C 68.2 15 22 C 68.18181818 15 ConsensusfromContig1569 349 336 SNP 1 A 2 T/A 63.6/36.4 14/8 22 T 63.63636364 14 A 36.36363636 8 ConsensusfromContig1678 521 520 SNP 1 A 1 T 72.7 16 22 T 72.72727273 16 ConsensusfromContig1714 575 571 SNP 1 A 1 G 72.7 16 22 G 72.72727273 16 ConsensusfromContig2034 61 52 SNP 1 C 1 T 68.2 15 22 T 68.18181818 15 ConsensusfromContig2045 514 497 SNP 1 A 1 C 100 22 22 C 100 22 ConsensusfromContig2045 515 498 SNP 1 C 1 T 100 22 22 T 100 22 ConsensusfromContig2130 12 7 SNP 1 T 1 C 100 22 22 C 100 22 ConsensusfromContig2304 37 26 SNP 1 G 1 A 90.9 20 22 A 90.90909091 20 ConsensusfromContig2466 274 261 SNP 1 G 1 A 95.5 21 22 A 95.45454545 21 ConsensusfromContig2499 143 127 SNP 1 G 2 G/A 54.5/45.5 12/10 22 G 54.54545455 12 A 45.45454545 10 ConsensusfromContig2798 397 338 SNP 1 A 2 A/C 54.5/45.5 12/10 22 A 54.54545455 12 C 45.45454545 10 ConsensusfromContig3039 210 195 SNP 1 T 1 C 68.2 15 22 C 68.18181818 15 ConsensusfromContig3358 289 281 SNP 1 G 1 A 100 22 22 A 100 22 ConsensusfromContig3442 370 370 SNP 1 T 2 C/T 50.0/50.0 11/11 22 C 50 11 T 50 11 ConsensusfromContig3893 217 190 SNP 1 C 1 T 100 22 22 T 100 22 ConsensusfromContig4297 14 5 SNP 1 A 2 G/A 63.6/36.4 14/8 22 G 63.63636364 14 A 36.36363636 8 ConsensusfromContig4410 246 199 SNP 1 A 2 A/C 59.1/40.9 13/9 22 A 59.09090909 13 C 40.90909091 9 ConsensusfromContig4530 552 435 SNP 1 T 1 A 100 22 22 A 100 22 ConsensusfromContig5131 297 240 SNP 1 G 2 G/T 63.6/36.4 14/8 22 G 63.63636364 14 T 36.36363636 8 ConsensusfromContig5140 539 525 SNP 1 G 1 A 72.7 16 22 A 72.72727273 16 ConsensusfromContig5600 303 296 SNP 1 G 2 G/A 63.6/36.4 14/8 22 G 63.63636364 14 A 36.36363636 8 ConsensusfromContig5744 117 102 SNP 1 T 2 T/C 54.5/45.5 12/10 22 T 54.54545455 12 C 45.45454545 10 ConsensusfromContig5867 540 465 SNP 1 A 1 C 100 22 22 C 100 22 ConsensusfromContig6481 189 189 SNP 1 A 1 G 95.5 21 22 G 95.45454545 21 ConsensusfromContig6922 182 48 SNP 1 G 2 G/A 63.6/36.4 14/8 22 G 63.63636364 14 A 36.36363636 8 ConsensusfromContig7051 179 135 SNP 1 C 1 T 100 22 22 T 100 22 ConsensusfromContig7110 165 79 SNP 1 T 2 C/T 59.1/40.9 13/9 22 C 59.09090909 13 T 40.90909091 9 ConsensusfromContig7332 415 239 SNP 1 T 2 G/T 50.0/50.0 11/11 22 G 50 11 T 50 11 ConsensusfromContig7370 85 85 SNP 1 C 2 T/C 54.5/45.5 12/10 22 T 54.54545455 12 C 45.45454545 10 ConsensusfromContig7436 53 34 SNP 1 G 1 T 100 22 22 T 100 22 ConsensusfromContig7686 228 120 SNP 1 G 1 T 77.3 17 22 T 77.27272727 17 ConsensusfromContig7968 372 355 SNP 1 C 1 T 100 22 22 T 100 22 ConsensusfromContig8075 558 390 SNP 1 G 1 A 72.7 16 22 A 72.72727273 16 ConsensusfromContig8139 437 424 SNP 1 T 1 C 72.7 16 22 C 72.72727273 16 ConsensusfromContig8171 382 380 SNP 1 C 1 T 100 22 22 T 100 22 ConsensusfromContig8301 82 81 SNP 1 A 2 T/A 54.5/45.5 12/10 22 T 54.54545455 12 A 45.45454545 10 ConsensusfromContig8522 440 381 SNP 1 G 2 G/A 54.5/45.5 12/10 22 G 54.54545455 12 A 45.45454545 10 ConsensusfromContig8636 227 227 SNP 1 C 2 C/T 50.0/50.0 11/11 22 C 50 11 T 50 11 ConsensusfromContig8948 58 58 SNP 1 G 1 T 68.2 15 22 T 68.18181818 15 ConsensusfromContig91 241 237 SNP 1 T 2 C/T 52.2/47.8 12/11 23 C 52.17391304 12 T 47.82608696 11 ConsensusfromContig248 54 18 SNP 1 A 1 G 100 23 23 G 100 23 ConsensusfromContig564 112 112 SNP 1 T 2 T/C 52.2/47.8 12/11 23 T 52.17391304 12 C 47.82608696 11 ConsensusfromContig732 191 175 SNP 1 C 1 G 100 23 23 G 100 23 ConsensusfromContig756 361 345 SNP 1 A 1 G 100 23 23 G 100 23 ConsensusfromContig1172 275 251 SNP 1 A 1 G 65.2 15 23 G 65.2173913 15 ConsensusfromContig1182 488 435 SNP 1 A 2 C/A 56.5/43.5 13/10 23 C 56.52173913 13 A 43.47826087 10 ConsensusfromContig1432 246 233 SNP 1 A 1 C 100 23 23 C 100 23 ConsensusfromContig1508 372 369 SNP 1 G 1 T 78.3 18 23 T 78.26086957 18 ConsensusfromContig1647 247 246 SNP 1 C 2 T/C 52.2/47.8 12/11 23 T 52.17391304 12 C 47.82608696 11 ConsensusfromContig1707 268 251 SNP 1 C 1 T 100 23 23 T 100 23 ConsensusfromContig1976 393 369 SNP 1 G 2 G/A 56.5/43.5 13/10 23 G 56.52173913 13 A 43.47826087 10 ConsensusfromContig1976 420 396 SNP 1 T 1 C 73.9 17 23 C 73.91304348 17 ConsensusfromContig2377 398 114 SNP 1 G 1 A 100 23 23 A 100 23 ConsensusfromContig2641 711 551 SNP 1 C 1 G 82.6 19 23 G 82.60869565 19 ConsensusfromContig2748 18 6 SNP 1 C 1 T 100 23 23 T 100 23 ConsensusfromContig2823 195 164 SNP 1 A 1 G 100 23 23 G 100 23 ConsensusfromContig3110 216 180 SNP 1 T 1 C 78.3 18 23 C 78.26086957 18 ConsensusfromContig3130 130 130 SNP 1 C 2 T/C 52.2/47.8 12/11 23 T 52.17391304 12 C 47.82608696 11 ConsensusfromContig3238 56 42 SNP 1 A 2 G/A 60.9/39.1 14/9 23 G 60.86956522 14 A 39.13043478 9 ConsensusfromContig3295 269 269 SNP 1 C 2 C/T 52.2/47.8 12/11 23 C 52.17391304 12 T 47.82608696 11 ConsensusfromContig3554 207 178 SNP 1 C 2 T/C 60.9/39.1 14/9 23 T 60.86956522 14 C 39.13043478 9 ConsensusfromContig3958 439 439 SNP 1 C 1 T 100 23 23 T 100 23 ConsensusfromContig4152 295 253 SNP 1 C 1 G 82.6 19 23 G 82.60869565 19 ConsensusfromContig4272 186 158 SNP 1 C 1 T 100 23 23 T 100 23 ConsensusfromContig4415 197 174 SNP 1 C 1 G 69.6 16 23 G 69.56521739 16 ConsensusfromContig4638 256 183 SNP 1 G 2 G/T 52.2/47.8 12/11 23 G 52.17391304 12 T 47.82608696 11 ConsensusfromContig5205 275 269 SNP 1 G 1 A 65.2 15 23 A 65.2173913 15 ConsensusfromContig5636 203 203 SNP 1 C 2 C/T 60.9/39.1 14/9 23 C 60.86956522 14 T 39.13043478 9 ConsensusfromContig6658 149 141 SNP 1 A 1 G 100 23 23 G 100 23 ConsensusfromContig7325 420 290 SNP 1 T 1 C 100 23 23 C 100 23 ConsensusfromContig7370 250 250 SNP 1 A 2 G/A 52.2/47.8 12/11 23 G 52.17391304 12 A 47.82608696 11 ConsensusfromContig7502 402 366 SNP 1 C 2 C/T 52.2/47.8 12/11 23 C 52.17391304 12 T 47.82608696 11 ConsensusfromContig7508 257 256 SNP 1 A 1 G 100 23 23 G 100 23 ConsensusfromContig7514 78 67 SNP 1 T 2 T/G 56.5/43.5 13/10 23 T 56.52173913 13 G 43.47826087 10 ConsensusfromContig7529 102 100 SNP 1 C 1 T 95.7 22 23 T 95.65217391 22 ConsensusfromContig7800 335 294 SNP 1 C 1 T 95.7 22 23 T 95.65217391 22 ConsensusfromContig8090 294 205 SNP 1 G 2 G/A 52.2/47.8 12/11 23 G 52.17391304 12 A 47.82608696 11 ConsensusfromContig8528 108 108 SNP 1 A 1 G 69.6 16 23 G 69.56521739 16 ConsensusfromContig8636 111 111 SNP 1 A 2 C/A 56.5/43.5 13/10 23 C 56.52173913 13 A 43.47826087 10 ConsensusfromContig8748 288 288 SNP 1 G 2 G/A 52.2/47.8 12/11 23 G 52.17391304 12 A 47.82608696 11 ConsensusfromContig8895 41 41 SNP 1 C 1 T 65.2 15 23 T 65.2173913 15 ConsensusfromContig8948 174 174 SNP 1 A 2 A/G 56.5/43.5 13/10 23 A 56.52173913 13 G 43.47826087 10 ConsensusfromContig8969 494 494 SNP 1 G 2 G/A 56.5/43.5 13/10 23 G 56.52173913 13 A 43.47826087 10 ConsensusfromContig9359 62 60 SNP 1 T 1 A 100 23 23 A 100 23 ConsensusfromContig722 19 19 SNP 1 C 1 T 91.7 22 24 T 91.66666667 22 ConsensusfromContig1337 75 75 SNP 1 A 1 G 100 24 24 G 100 24 ConsensusfromContig1625 64 59 SNP 1 T 2 C/T 62.5/37.5 15/9 24 C 62.5 15 T 37.5 9 ConsensusfromContig1647 250 249 SNP 1 T 2 C/T 50.0/50.0 12/12 24 C 50 12 T 50 12 ConsensusfromContig1932 416 399 SNP 1 G 2 G/A 62.5/37.5 15/9 24 G 62.5 15 A 37.5 9 ConsensusfromContig2423 67 28 SNP 1 G 2 G/A 58.3/41.7 14/10 24 G 58.33333333 14 A 41.66666667 10 ConsensusfromContig2499 127 111 SNP 1 C 2 T/C 54.2/45.8 13/11 24 T 54.16666667 13 C 45.83333333 11 ConsensusfromContig2696 326 293 SNP 1 A 1 G 100 24 24 G 100 24 ConsensusfromContig2701 63 27 SNP 1 T 1 C 100 24 24 C 100 24 ConsensusfromContig2803 69 30 SNP 1 G 1 T 75 18 24 T 75 18 ConsensusfromContig3011 87 87 SNP 1 G 1 A 100 24 24 A 100 24 ConsensusfromContig3143 366 318 SNP 1 C 1 T 100 24 24 T 100 24 ConsensusfromContig3319 410 314 SNP 1 A 1 G 100 24 24 G 100 24 ConsensusfromContig3881 97 95 SNP 1 C 1 T 66.7 16 24 T 66.66666667 16 ConsensusfromContig3928 355 346 SNP 1 A 1 G 100 24 24 G 100 24 ConsensusfromContig4539 124 80 SNP 1 A 1 C 95.8 23 24 C 95.83333333 23 ConsensusfromContig5029 116 106 SNP 1 A 1 G 62.5 15 24 G 62.5 15 ConsensusfromContig5973 179 179 SNP 1 G 2 G/A 62.5/37.5 15/9 24 G 62.5 15 A 37.5 9 ConsensusfromContig6312 333 333 SNP 1 C 1 T 100 24 24 T 100 24 ConsensusfromContig6329 205 151 SNP 1 G 1 A 95.8 23 24 A 95.83333333 23 ConsensusfromContig6526 93 76 SNP 1 A 1 G 95.8 23 24 G 95.83333333 23 ConsensusfromContig6838 46 39 SNP 1 T 1 C 79.2 19 24 C 79.16666667 19 ConsensusfromContig7077 253 191 SNP 1 C 1 T 100 24 24 T 100 24 ConsensusfromContig7153 179 168 SNP 1 C 2 C/T 58.3/41.7 14/10 24 C 58.33333333 14 T 41.66666667 10 ConsensusfromContig7299 368 367 SNP 1 C 1 T 100 24 24 T 100 24 ConsensusfromContig7409 46 46 SNP 1 A 1 C 91.7 22 24 C 91.66666667 22 ConsensusfromContig7542 231 193 SNP 1 A 1 G 95.8 23 24 G 95.83333333 23 ConsensusfromContig7628 192 189 SNP 1 G 1 A 100 24 24 A 100 24 ConsensusfromContig8011 774 698 SNP 1 C 2 C/T 62.5/37.5 15/9 24 C 62.5 15 T 37.5 9 ConsensusfromContig8075 426 258 SNP 1 G 2 G/T 50.0/45.8 12/11 24 G 50 12 T 45.83333333 11 ConsensusfromContig8686 466 395 SNP 1 A 2 A/G 50.0/50.0 12/12 24 A 50 12 G 50 12 ConsensusfromContig8827 294 294 SNP 1 C 1 T 79.2 19 24 T 79.16666667 19 ConsensusfromContig8969 172 172 SNP 1 T 2 C/T 50.0/50.0 12/12 24 C 50 12 T 50 12 ConsensusfromContig9000 119 104 SNP 1 C 1 T 100 24 24 T 100 24 ConsensusfromContig9300 235 63 SNP 1 C 1 G 75 18 24 G 75 18 ConsensusfromContig387 53 33 SNP 1 C 1 T 100 25 25 T 100 25 ConsensusfromContig602 69 60 SNP 1 T 2 T/A 60.0/40.0 15/10 25 T 60 15 A 40 10 ConsensusfromContig773 265 239 SNP 1 G 1 A 92 23 25 A 92 23 ConsensusfromContig1187 96 12 SNP 1 T 2 T/G 64.0/36.0 16/9 25 T 64 16 G 36 9 ConsensusfromContig1432 30 24 SNP 1 G 2 A/G 60.0/40.0 15/10 25 A 60 15 G 40 10 ConsensusfromContig1647 154 153 SNP 1 A 1 G 72 18 25 G 72 18 ConsensusfromContig1665 295 254 SNP 1 T 2 C/T 52.0/48.0 13/12 25 C 52 13 T 48 12 ConsensusfromContig2131 149 88 SNP 1 G 2 G/A 52.0/48.0 13/12 25 G 52 13 A 48 12 ConsensusfromContig2293 23 10 SNP 1 T 1 C 92 23 25 C 92 23 ConsensusfromContig2298 351 265 SNP 1 A 1 G 100 25 25 G 100 25 ConsensusfromContig2641 723 563 SNP 1 T 1 A 68 17 25 A 68 17 ConsensusfromContig2672 163 133 SNP 1 T 1 A 100 25 25 A 100 25 ConsensusfromContig3440 582 580 SNP 1 G 1 A 100 25 25 A 100 25 ConsensusfromContig3528 197 145 SNP 1 A 2 A/C 52.0/48.0 13/12 25 A 52 13 C 48 12 ConsensusfromContig3895 201 197 SNP 1 A 2 C/A 60.0/40.0 15/10 25 C 60 15 A 40 10 ConsensusfromContig3958 374 374 SNP 1 A 2 A/G 56.0/44.0 14/11 25 A 56 14 G 44 11 ConsensusfromContig4433 191 153 SNP 1 C 2 C/T 56.0/44.0 14/11 25 C 56 14 T 44 11 ConsensusfromContig5171 385 320 SNP 1 A 2 A/G 52.0/48.0 13/12 25 A 52 13 G 48 12 ConsensusfromContig5874 424 395 SNP 1 A 1 T 80 20 25 T 80 20 ConsensusfromContig6352 276 254 SNP 1 A 1 G 76 19 25 G 76 19 ConsensusfromContig7007 345 320 SNP 1 A 1 C 100 25 25 C 100 25 ConsensusfromContig7401 194 156 SNP 1 A 2 A/G 60.0/36.0 15/9 25 A 60 15 G 36 9 ConsensusfromContig7501 306 273 SNP 1 G 2 A/G 52.0/48.0 13/12 25 A 52 13 G 48 12 ConsensusfromContig7514 35 24 SNP 1 A 2 G/A 60.0/40.0 15/10 25 G 60 15 A 40 10 ConsensusfromContig8067 372 334 SNP 1 C 1 G 96 24 25 G 96 24 ConsensusfromContig8522 125 74 SNP 1 T 2 T/C 64.0/36.0 16/9 25 T 64 16 C 36 9 ConsensusfromContig8636 225 225 SNP 1 G 2 T/G 56.0/44.0 14/11 25 T 56 14 G 44 11 ConsensusfromContig8639 372 318 SNP 1 G 1 A 84 21 25 A 84 21 ConsensusfromContig8890 217 215 SNP 1 C 2 C/G 60.0/40.0 15/10 25 C 60 15 G 40 10 ConsensusfromContig660 97 68 SNP 1 C 1 T 84.6 22 26 T 84.61538462 22 ConsensusfromContig1137 190 103 SNP 1 C 1 T 76.9 20 26 T 76.92307692 20 ConsensusfromContig1167 221 191 SNP 1 T 2 A/T 57.7/38.5 15/10 26 A 57.69230769 15 T 38.46153846 10 ConsensusfromContig1569 72 59 SNP 1 G 2 T/G 57.7/42.3 15/11 26 T 57.69230769 15 G 42.30769231 11 ConsensusfromContig1582 127 95 SNP 1 A 2 A/G 53.8/46.2 14/12 26 A 53.84615385 14 G 46.15384615 12 ConsensusfromContig1759 226 188 SNP 1 G 2 A/G 53.8/46.2 14/12 26 A 53.84615385 14 G 46.15384615 12 ConsensusfromContig1976 576 546 SNP 1 C 1 A 80.8 21 26 A 80.76923077 21 ConsensusfromContig2108 145 66 SNP 1 T 2 C/T 50.0/50.0 13/13 26 C 50 13 T 50 13 ConsensusfromContig2131 143 82 SNP 1 C 2 C/T 53.8/46.2 14/12 26 C 53.84615385 14 T 46.15384615 12 ConsensusfromContig3042 318 303 SNP 1 A 1 G 100 26 26 G 100 26 ConsensusfromContig3366 58 58 SNP 1 G 1 T 69.2 18 26 T 69.23076923 18 ConsensusfromContig3832 155 148 SNP 1 T 1 C 65.4 17 26 C 65.38461538 17 ConsensusfromContig3895 273 269 SNP 1 C 1 T 96.2 25 26 T 96.15384615 25 ConsensusfromContig3958 377 377 SNP 1 C 2 T/C 57.7/42.3 15/11 26 T 57.69230769 15 C 42.30769231 11 ConsensusfromContig3980 90 61 SNP 1 A 1 G 88.5 23 26 G 88.46153846 23 ConsensusfromContig4232 169 164 SNP 1 A 1 G 100 26 26 G 100 26 ConsensusfromContig4782 728 696 SNP 1 G 2 C/G 50.0/50.0 13/13 26 C 50 13 G 50 13 ConsensusfromContig4916 42 36 SNP 1 G 1 C 69.2 18 26 C 69.23076923 18 ConsensusfromContig5234 177 145 SNP 1 A 1 G 80.8 21 26 G 80.76923077 21 ConsensusfromContig5758 80 76 SNP 1 A 2 A/G 61.5/38.5 16/10 26 A 61.53846154 16 G 38.46153846 10 ConsensusfromContig5983 100 89 SNP 1 A 1 G 76.9 20 26 G 76.92307692 20 ConsensusfromContig6155 315 237 SNP 1 C 1 T 100 26 26 T 100 26 ConsensusfromContig6157 52 48 SNP 1 G 1 T 76.9 20 26 T 76.92307692 20 ConsensusfromContig6233 261 259 SNP 1 C 1 T 76.9 20 26 T 76.92307692 20 ConsensusfromContig6360 142 115 SNP 1 A 1 G 100 26 26 G 100 26 ConsensusfromContig7113 510 369 SNP 1 A 1 C 100 26 26 C 100 26 ConsensusfromContig8353 423 273 SNP 1 A 1 G 96.2 25 26 G 96.15384615 25 ConsensusfromContig8435 473 426 SNP 1 G 2 G/T 53.8/46.2 14/12 26 G 53.84615385 14 T 46.15384615 12 ConsensusfromContig8969 488 488 SNP 1 G 2 G/A 53.8/46.2 14/12 26 G 53.84615385 14 A 46.15384615 12 ConsensusfromContig8990 267 248 SNP 1 G 1 T 76.9 20 26 T 76.92307692 20 ConsensusfromContig722 43 43 SNP 1 C 1 T 96.3 26 27 T 96.2962963 26 ConsensusfromContig937 159 145 SNP 1 A 2 A/T 55.6/44.4 15/12 27 A 55.55555556 15 T 44.44444444 12 ConsensusfromContig1097 277 260 SNP 1 A 1 T 100 27 27 T 100 27 ConsensusfromContig1151 885 789 SNP 1 C 1 T 100 27 27 T 100 27 ConsensusfromContig1172 457 423 SNP 1 G 2 G/A 55.6/44.4 15/12 27 G 55.55555556 15 A 44.44444444 12 ConsensusfromContig1208 650 579 SNP 1 G 1 A 100 27 27 A 100 27 ConsensusfromContig1759 424 386 SNP 1 T 1 G 100 27 27 G 100 27 ConsensusfromContig2049 94 90 SNP 1 C 1 T 100 27 27 T 100 27 ConsensusfromContig2517 164 149 SNP 1 A 1 T 100 27 27 T 100 27 ConsensusfromContig2696 331 298 SNP 1 C 1 T 100 27 27 T 100 27 ConsensusfromContig3117 626 581 SNP 1 G 1 A 100 27 27 A 100 27 ConsensusfromContig3356 248 222 SNP 1 T 2 C/T 63.0/37.0 17/10 27 C 62.96296296 17 T 37.03703704 10 ConsensusfromContig3675 97 75 SNP 1 T 2 C/T 51.9/48.1 14/13 27 C 51.85185185 14 T 48.14814815 13 ConsensusfromContig3895 203 199 SNP 1 A 2 A/T 59.3/40.7 16/11 27 A 59.25925926 16 T 40.74074074 11 ConsensusfromContig3958 373 373 SNP 1 G 2 G/T 55.6/44.4 15/12 27 G 55.55555556 15 T 44.44444444 12 ConsensusfromContig4037 212 212 SNP 1 G 1 A 100 27 27 A 100 27 ConsensusfromContig4916 162 156 SNP 1 T 1 G 70.4 19 27 G 70.37037037 19 ConsensusfromContig6330 199 140 SNP 1 A 2 G/A 55.6/44.4 15/12 27 G 55.55555556 15 A 44.44444444 12 ConsensusfromContig6546 192 142 SNP 1 G 2 G/A 59.3/40.7 16/11 27 G 59.25925926 16 A 40.74074074 11 ConsensusfromContig6681 112 85 SNP 1 G 1 T 74.1 20 27 T 74.07407407 20 ConsensusfromContig6804 402 383 SNP 1 A 1 G 100 27 27 G 100 27 ConsensusfromContig7322 294 274 SNP 1 C 1 T 100 27 27 T 100 27 ConsensusfromContig8070 294 259 SNP 1 G 1 T 81.5 22 27 T 81.48148148 22 ConsensusfromContig8075 814 646 SNP 1 A 1 C 77.8 21 27 C 77.77777778 21 ConsensusfromContig8171 416 414 SNP 1 A 1 C 92.6 25 27 C 92.59259259 25 ConsensusfromContig8777 107 98 SNP 1 G 2 A/G 51.9/48.1 14/13 27 A 51.85185185 14 G 48.14814815 13 ConsensusfromContig9034 302 252 SNP 1 A 1 G 74.1 20 27 G 74.07407407 20 ConsensusfromContig87 196 190 SNP 1 A 1 T 78.6 22 28 T 78.57142857 22 ConsensusfromContig458 56 30 SNP 1 A 2 A/G 50.0/42.9 14/12 28 A 50 14 G 42.85714286 12 ConsensusfromContig571 299 235 SNP 1 G 1 T 100 28 28 T 100 28 ConsensusfromContig579 215 184 SNP 1 C 1 T 100 28 28 T 100 28 ConsensusfromContig590 151 126 SNP 1 A 2 A/G 57.1/39.3 16/11 28 A 57.14285714 16 G 39.28571429 11 ConsensusfromContig660 232 203 SNP 1 A 2 A/G 50.0/50.0 14/14 28 A 50 14 G 50 14 ConsensusfromContig928 226 182 SNP 1 A 1 G 100 28 28 G 100 28 ConsensusfromContig1132 146 25 SNP 1 G 1 A 85.7 24 28 A 85.71428571 24 ConsensusfromContig1976 627 591 SNP 1 C 2 C/A 64.3/35.7 18/10 28 C 64.28571429 18 A 35.71428571 10 ConsensusfromContig2108 200 121 SNP 1 C 2 C/G 64.3/35.7 18/10 28 C 64.28571429 18 G 35.71428571 10 ConsensusfromContig2177 410 390 SNP 1 C 1 G 96.4 27 28 G 96.42857143 27 ConsensusfromContig2177 425 405 SNP 1 G 1 A 100 28 28 A 100 28 ConsensusfromContig2678 214 214 SNP 1 T 1 C 96.4 27 28 C 96.42857143 27 ConsensusfromContig2823 183 152 SNP 1 C 1 T 100 28 28 T 100 28 ConsensusfromContig3236 124 124 SNP 1 C 2 T/C 60.7/39.3 17/11 28 T 60.71428571 17 C 39.28571429 11 ConsensusfromContig3270 538 452 SNP 1 A 2 G/A 64.3/35.7 18/10 28 G 64.28571429 18 A 35.71428571 10 ConsensusfromContig3296 43 28 SNP 1 T 1 C 100 28 28 C 100 28 ConsensusfromContig4006 45 36 SNP 1 G 1 A 100 28 28 A 100 28 ConsensusfromContig4078 213 173 SNP 1 G 2 T/G 60.7/39.3 17/11 28 T 60.71428571 17 G 39.28571429 11 ConsensusfromContig4573 249 178 SNP 1 C 1 T 100 28 28 T 100 28 ConsensusfromContig5131 126 69 SNP 1 G 2 G/A 64.3/35.7 18/10 28 G 64.28571429 18 A 35.71428571 10 ConsensusfromContig5205 298 292 SNP 1 T 2 T/C 60.7/39.3 17/11 28 T 60.71428571 17 C 39.28571429 11 ConsensusfromContig6194 165 121 SNP 1 A 1 G 78.6 22 28 G 78.57142857 22 ConsensusfromContig6312 348 348 SNP 1 G 1 A 100 28 28 A 100 28 ConsensusfromContig7409 23 23 SNP 1 C 1 T 100 28 28 T 100 28 ConsensusfromContig7472 378 322 SNP 1 C 1 T 100 28 28 T 100 28 ConsensusfromContig7569 427 402 SNP 1 C 1 T 100 28 28 T 100 28 ConsensusfromContig7664 117 31 SNP 1 T 1 A 71.4 20 28 A 71.42857143 20 ConsensusfromContig7671 204 186 SNP 1 G 1 A 100 28 28 A 100 28 ConsensusfromContig8336 263 245 SNP 1 T 1 C 89.3 25 28 C 89.28571429 25 ConsensusfromContig8645 185 149 SNP 1 G 1 T 100 28 28 T 100 28 ConsensusfromContig8990 314 295 SNP 1 C 2 C/A 53.6/42.9 15/12 28 C 53.57142857 15 A 42.85714286 12 ConsensusfromContig9002 569 480 SNP 1 A 2 A/G 50.0/50.0 14/14 28 A 50 14 G 50 14 ConsensusfromContig9050 211 200 SNP 1 C 1 T 100 28 28 T 100 28 ConsensusfromContig508 141 78 Complex SNP 1 A 2 C/G 48.3/48.3 14/14 29 C 48.27586207 14 G 48.27586207 14 ConsensusfromContig584 261 233 SNP 1 C 1 T 72.4 21 29 T 72.4137931 21 ConsensusfromContig821 24 24 SNP 1 G 2 C/G 51.7/48.3 15/14 29 C 51.72413793 15 G 48.27586207 14 ConsensusfromContig1163 266 122 SNP 1 G 1 T 100 29 29 T 100 29 ConsensusfromContig1194 148 148 SNP 1 T 2 T/C 62.1/37.9 18/11 29 T 62.06896552 18 C 37.93103448 11 ConsensusfromContig1696 44 17 SNP 1 G 2 G/T 62.1/37.9 18/11 29 G 62.06896552 18 T 37.93103448 11 ConsensusfromContig2641 930 770 SNP 1 C 1 T 100 29 29 T 100 29 ConsensusfromContig2764 87 80 SNP 1 A 1 G 75.9 22 29 G 75.86206897 22 ConsensusfromContig2857 267 223 SNP 1 G 2 G/A 51.7/48.3 15/14 29 G 51.72413793 15 A 48.27586207 14 ConsensusfromContig2987 28 28 SNP 1 A 1 C 65.5 19 29 C 65.51724138 19 ConsensusfromContig3219 185 169 SNP 1 C 2 A/C 44.8/37.9 13/11 29 A 44.82758621 13 C 37.93103448 11 ConsensusfromContig3651 341 338 SNP 1 C 1 T 100 29 29 T 100 29 ConsensusfromContig3905 223 191 SNP 1 T 1 G 82.8 24 29 G 82.75862069 24 ConsensusfromContig4019 19 19 SNP 1 G 1 T 69 20 29 T 68.96551724 20 ConsensusfromContig4433 209 171 SNP 1 C 1 T 100 29 29 T 100 29 ConsensusfromContig5311 65 65 SNP 1 C 2 C/A 58.6/41.4 17/12 29 C 58.62068966 17 A 41.37931034 12 ConsensusfromContig5311 95 95 SNP 1 G 1 A 79.3 23 29 A 79.31034483 23 ConsensusfromContig5758 200 196 SNP 1 C 2 C/T 58.6/41.4 17/12 29 C 58.62068966 17 T 41.37931034 12 ConsensusfromContig6215 455 413 SNP 1 G 1 A 100 29 29 A 100 29 ConsensusfromContig6546 410 360 SNP 1 T 2 T/C 62.1/37.9 18/11 29 T 62.06896552 18 C 37.93103448 11 ConsensusfromContig7088 248 224 SNP 1 A 1 G 89.7 26 29 G 89.65517241 26 ConsensusfromContig7113 329 188 SNP 1 C 1 T 93.1 27 29 T 93.10344828 27 ConsensusfromContig7133 369 346 SNP 1 G 1 A 86.2 25 29 A 86.20689655 25 ConsensusfromContig7376 160 129 SNP 1 T 2 T/C 55.2/44.8 16/13 29 T 55.17241379 16 C 44.82758621 13 ConsensusfromContig7877 453 410 SNP 1 G 2 G/A 62.1/37.9 18/11 29 G 62.06896552 18 A 37.93103448 11 ConsensusfromContig8214 718 544 SNP 1 T 1 C 100 29 29 C 100 29 ConsensusfromContig8748 41 41 SNP 1 G 1 C 69 20 29 C 68.96551724 20 ConsensusfromContig8943 470 464 SNP 1 A 2 G/A 55.2/44.8 16/13 29 G 55.17241379 16 A 44.82758621 13 ConsensusfromContig8990 329 310 SNP 1 T 1 C 100 29 29 C 100 29 ConsensusfromContig9323 51 51 SNP 1 T 1 C 100 29 29 C 100 29 ConsensusfromContig1216 128 54 SNP 1 G 1 T 90 27 30 T 90 27 ConsensusfromContig1216 306 213 SNP 1 G 2 G/A 60.0/40.0 18/12 30 G 60 18 A 40 12 ConsensusfromContig2028 363 248 SNP 1 A 1 G 100 30 30 G 100 30 ConsensusfromContig2776 467 439 SNP 1 A 1 C 100 30 30 C 100 30 ConsensusfromContig3675 99 77 SNP 1 C 2 C/G 53.3/46.7 16/14 30 C 53.33333333 16 G 46.66666667 14 ConsensusfromContig3958 421 421 SNP 1 C 1 T 100 30 30 T 100 30 ConsensusfromContig4415 190 167 SNP 1 A 2 T/A 60.0/40.0 18/12 30 T 60 18 A 40 12 ConsensusfromContig4903 472 472 SNP 1 G 1 A 100 30 30 A 100 30 ConsensusfromContig5423 221 197 SNP 1 T 1 C 100 30 30 C 100 30 ConsensusfromContig5874 286 257 SNP 1 A 1 G 100 30 30 G 100 30 ConsensusfromContig5874 409 380 SNP 1 G 1 A 80 24 30 A 80 24 ConsensusfromContig6239 210 180 SNP 1 C 2 A/C 50.0/50.0 15/15 30 A 50 15 C 50 15 ConsensusfromContig6364 371 365 SNP 1 A 2 A/T 63.3/36.7 19/11 30 A 63.33333333 19 T 36.66666667 11 ConsensusfromContig6382 35 29 SNP 1 A 1 G 70 21 30 G 70 21 ConsensusfromContig8441 317 227 SNP 1 T 1 A 86.7 26 30 A 86.66666667 26 ConsensusfromContig8802 160 158 SNP 1 A 1 T 100 30 30 T 100 30 ConsensusfromContig8886 328 270 SNP 1 A 1 G 73.3 22 30 G 73.33333333 22 ConsensusfromContig8890 222 220 SNP 1 T 2 T/C 53.3/46.7 16/14 30 T 53.33333333 16 C 46.66666667 14 ConsensusfromContig460 96 80 SNP 1 G 2 G/C 61.3/38.7 19/12 31 G 61.29032258 19 C 38.70967742 12 ConsensusfromContig602 114 105 SNP 1 T 2 T/G 51.6/48.4 16/15 31 T 51.61290323 16 G 48.38709677 15 ConsensusfromContig713 254 246 SNP 1 G 1 A 96.8 30 31 A 96.77419355 30 ConsensusfromContig1182 177 137 SNP 1 C 2 C/T 64.5/35.5 20/11 31 C 64.51612903 20 T 35.48387097 11 ConsensusfromContig1390 199 185 SNP 1 G 1 A 100 31 31 A 100 31 ConsensusfromContig1418 16 16 SNP 1 C 2 C/T 54.8/45.2 17/14 31 C 54.83870968 17 T 45.16129032 14 ConsensusfromContig1976 558 528 SNP 1 C 2 C/T 54.8/45.2 17/14 31 C 54.83870968 17 T 45.16129032 14 ConsensusfromContig2790 239 218 SNP 1 A 2 A/C 58.1/41.9 18/13 31 A 58.06451613 18 C 41.93548387 13 ConsensusfromContig2796 72 47 SNP 1 C 2 C/T 54.8/45.2 17/14 31 C 54.83870968 17 T 45.16129032 14 ConsensusfromContig2914 64 54 SNP 1 C 1 G 100 31 31 G 100 31 ConsensusfromContig3203 268 260 SNP 1 C 2 C/T 58.1/41.9 18/13 31 C 58.06451613 18 T 41.93548387 13 ConsensusfromContig3215 214 153 SNP 1 G 2 A/G 54.8/45.2 17/14 31 A 54.83870968 17 G 45.16129032 14 ConsensusfromContig3225 33 21 SNP 1 T 1 C 77.4 24 31 C 77.41935484 24 ConsensusfromContig3265 560 441 SNP 1 T 2 T/A 51.6/48.4 16/15 31 T 51.61290323 16 A 48.38709677 15 ConsensusfromContig3313 1246 721 SNP 1 A 1 T 71 22 31 T 70.96774194 22 ConsensusfromContig3572 236 146 SNP 1 A 1 C 90.3 28 31 C 90.32258065 28 ConsensusfromContig3744 422 389 SNP 1 A 1 G 96.8 30 31 G 96.77419355 30 ConsensusfromContig4536 59 49 SNP 1 A 1 C 74.2 23 31 C 74.19354839 23 ConsensusfromContig4571 342 298 SNP 1 T 2 T/A 64.5/35.5 20/11 31 T 64.51612903 20 A 35.48387097 11 ConsensusfromContig4752 221 170 SNP 1 A 1 T 100 31 31 T 100 31 ConsensusfromContig4898 45 45 SNP 1 C 1 G 100 31 31 G 100 31 ConsensusfromContig4904 411 402 SNP 1 C 2 G/C 51.6/48.4 16/15 31 G 51.61290323 16 C 48.38709677 15 ConsensusfromContig5233 350 91 SNP 1 A 1 T 80.6 25 31 T 80.64516129 25 ConsensusfromContig5263 434 385 SNP 1 A 1 G 90.3 28 31 G 90.32258065 28 ConsensusfromContig5270 259 237 SNP 1 T 1 A 100 31 31 A 100 31 ConsensusfromContig6330 357 285 SNP 1 T 2 T/A 51.6/48.4 16/15 31 T 51.61290323 16 A 48.38709677 15 ConsensusfromContig6623 37 28 SNP 1 A 2 G/A 58.1/41.9 18/13 31 G 58.06451613 18 A 41.93548387 13 ConsensusfromContig7376 142 111 SNP 1 G 2 G/T 61.3/38.7 19/12 31 G 61.29032258 19 T 38.70967742 12 ConsensusfromContig7456 80 80 SNP 1 A 2 A/G 58.1/41.9 18/13 31 A 58.06451613 18 G 41.93548387 13 ConsensusfromContig7514 380 369 SNP 1 G 2 G/T 58.1/41.9 18/13 31 G 58.06451613 18 T 41.93548387 13 ConsensusfromContig8184 496 472 SNP 1 T 1 C 100 31 31 C 100 31 ConsensusfromContig8948 471 471 SNP 1 A 1 C 100 31 31 C 100 31 ConsensusfromContig387 294 227 SNP 1 T 2 T/C 56.2/43.8 18/14 32 T 56.25 18 C 43.75 14 ConsensusfromContig481 392 331 SNP 1 G 2 G/A 56.2/43.8 18/14 32 G 56.25 18 A 43.75 14 ConsensusfromContig1233 718 683 SNP 1 A 1 G 100 32 32 G 100 32 ConsensusfromContig2507 428 402 SNP 1 C 2 T/C 53.1/46.9 17/15 32 T 53.125 17 C 46.875 15 ConsensusfromContig2537 208 203 SNP 1 A 1 T 59.4 19 32 T 59.375 19 ConsensusfromContig2790 244 223 SNP 1 T 2 T/C 53.1/46.9 17/15 32 T 53.125 17 C 46.875 15 ConsensusfromContig4037 304 304 SNP 1 A 2 A/G 53.1/46.9 17/15 32 A 53.125 17 G 46.875 15 ConsensusfromContig5219 55 26 SNP 1 C 1 T 65.6 21 32 T 65.625 21 ConsensusfromContig5251 118 118 SNP 1 T 1 C 100 32 32 C 100 32 ConsensusfromContig5698 54 34 SNP 1 G 2 G/A 62.5/37.5 20/12 32 G 62.5 20 A 37.5 12 ConsensusfromContig5698 80 60 SNP 1 T 2 T/C 56.2/43.8 18/14 32 T 56.25 18 C 43.75 14 ConsensusfromContig5734 471 463 SNP 1 A 1 G 100 32 32 G 100 32 ConsensusfromContig6224 356 333 SNP 1 G 1 A 100 32 32 A 100 32 ConsensusfromContig6507 168 158 SNP 1 A 1 G 78.1 25 32 G 78.125 25 ConsensusfromContig7452 185 140 SNP 1 G 1 T 87.5 28 32 T 87.5 28 ConsensusfromContig9172 487 455 SNP 1 G 1 A 100 32 32 A 100 32 ConsensusfromContig602 120 111 SNP 1 C 2 C/T 51.5/48.5 17/16 33 C 51.51515152 17 T 48.48484848 16 ConsensusfromContig602 252 243 SNP 1 A 1 C 100 33 33 C 100 33 ConsensusfromContig776 242 234 SNP 1 A 1 G 100 33 33 G 100 33 ConsensusfromContig1793 186 168 SNP 1 C 2 G/C 51.5/48.5 17/16 33 G 51.51515152 17 C 48.48484848 16 ConsensusfromContig2177 133 131 SNP 1 T 1 C 90.9 30 33 C 90.90909091 30 ConsensusfromContig2177 169 167 SNP 1 T 2 C/T 63.6/36.4 21/12 33 C 63.63636364 21 T 36.36363636 12 ConsensusfromContig2377 404 120 SNP 1 G 1 A 100 33 33 A 100 33 ConsensusfromContig2414 157 115 SNP 1 T 2 C/T 48.5/48.5 16/16 33 C 48.48484848 16 T 48.48484848 16 ConsensusfromContig2475 460 441 SNP 1 T 2 T/G 51.5/48.5 17/16 33 T 51.51515152 17 G 48.48484848 16 ConsensusfromContig3356 272 246 SNP 1 T 2 C/T 51.5/48.5 17/16 33 C 51.51515152 17 T 48.48484848 16 ConsensusfromContig3389 90 90 SNP 1 G 2 A/G 63.6/36.4 21/12 33 A 63.63636364 21 G 36.36363636 12 ConsensusfromContig3531 162 141 SNP 1 T 1 C 100 33 33 C 100 33 ConsensusfromContig4150 114 91 SNP 1 G 2 G/A 54.5/45.5 18/15 33 G 54.54545455 18 A 45.45454545 15 ConsensusfromContig4782 85 55 SNP 1 G 1 A 100 33 33 A 100 33 ConsensusfromContig5162 268 55 SNP 1 T 1 A 93.9 31 33 A 93.93939394 31 ConsensusfromContig5234 213 181 SNP 1 C 1 A 72.7 24 33 A 72.72727273 24 ConsensusfromContig5235 581 210 SNP 1 C 1 G 93.9 31 33 G 93.93939394 31 ConsensusfromContig5551 459 410 SNP 1 C 1 T 100 33 33 T 100 33 ConsensusfromContig5943 265 265 SNP 1 A 1 T 84.8 28 33 T 84.84848485 28 ConsensusfromContig6030 30 30 SNP 1 A 2 A/C 57.6/36.4 19/12 33 A 57.57575758 19 C 36.36363636 12 ConsensusfromContig6155 319 241 SNP 1 C 2 C/T 54.5/45.5 18/15 33 C 54.54545455 18 T 45.45454545 15 ConsensusfromContig6258 386 386 SNP 1 C 1 T 72.7 24 33 T 72.72727273 24 ConsensusfromContig6498 158 151 SNP 1 C 2 T/C 60.6/39.4 20/13 33 T 60.60606061 20 C 39.39393939 13 ConsensusfromContig6570 82 82 SNP 1 G 2 G/A 63.6/36.4 21/12 33 G 63.63636364 21 A 36.36363636 12 ConsensusfromContig7875 505 456 SNP 1 C 1 G 78.8 26 33 G 78.78787879 26 ConsensusfromContig8403 476 362 SNP 1 A 2 A/C 51.5/48.5 17/16 33 A 51.51515152 17 C 48.48484848 16 ConsensusfromContig9000 377 362 SNP 1 C 1 T 100 33 33 T 100 33 ConsensusfromContig40 17 17 SNP 1 C 1 T 100 34 34 T 100 34 ConsensusfromContig602 143 134 SNP 1 T 2 A/T 64.7/35.3 22/12 34 A 64.70588235 22 T 35.29411765 12 ConsensusfromContig1623 205 205 SNP 1 A 1 G 91.2 31 34 G 91.17647059 31 ConsensusfromContig2177 217 215 SNP 1 T 2 C/T 58.8/41.2 20/14 34 C 58.82352941 20 T 41.17647059 14 ConsensusfromContig2537 136 131 SNP 1 C 2 T/C 52.9/47.1 18/16 34 T 52.94117647 18 C 47.05882353 16 ConsensusfromContig2713 74 42 SNP 1 T 1 G 100 34 34 G 100 34 ConsensusfromContig2766 171 122 SNP 1 G 2 C/G 52.9/47.1 18/16 34 C 52.94117647 18 G 47.05882353 16 ConsensusfromContig2987 177 177 SNP 1 G 1 A 97.1 33 34 A 97.05882353 33 ConsensusfromContig3354 5 5 SNP 1 A 1 T 97.1 33 34 T 97.05882353 33 ConsensusfromContig3443 36 7 SNP 1 T 1 C 100 34 34 C 100 34 ConsensusfromContig4991 133 112 SNP 1 T 2 C/T 52.9/47.1 18/16 34 C 52.94117647 18 T 47.05882353 16 ConsensusfromContig5311 104 104 SNP 1 C 2 T/C 61.8/38.2 21/13 34 T 61.76470588 21 C 38.23529412 13 ConsensusfromContig5547 247 239 SNP 1 G 2 A/G 61.8/38.2 21/13 34 A 61.76470588 21 G 38.23529412 13 ConsensusfromContig5700 42 42 SNP 1 C 1 T 100 34 34 T 100 34 ConsensusfromContig6484 205 165 SNP 1 A 2 A/G 61.8/38.2 21/13 34 A 61.76470588 21 G 38.23529412 13 ConsensusfromContig6526 87 70 SNP 1 C 1 T 85.3 29 34 T 85.29411765 29 ConsensusfromContig7056 230 180 SNP 1 G 2 T/G 58.8/41.2 20/14 34 T 58.82352941 20 G 41.17647059 14 ConsensusfromContig7492 282 230 SNP 1 A 1 G 100 34 34 G 100 34 ConsensusfromContig8358 98 63 SNP 1 A 2 A/G 58.8/41.2 20/14 34 A 58.82352941 20 G 41.17647059 14 ConsensusfromContig8648 181 72 SNP 1 C 2 C/T 64.7/35.3 22/12 34 C 64.70588235 22 T 35.29411765 12 ConsensusfromContig8742 351 322 SNP 1 G 1 T 100 34 34 T 100 34 ConsensusfromContig8869 62 50 SNP 1 G 1 A 100 34 34 A 100 34 ConsensusfromContig8979 297 292 SNP 1 G 2 G/A 55.9/44.1 19/15 34 G 55.88235294 19 A 44.11764706 15 ConsensusfromContig655 123 123 SNP 1 T 1 C 100 35 35 C 100 35 ConsensusfromContig1193 55 43 SNP 1 A 2 A/G 54.3/45.7 19/16 35 A 54.28571429 19 G 45.71428571 16 ConsensusfromContig1432 33 27 SNP 1 A 1 G 65.7 23 35 G 65.71428571 23 ConsensusfromContig1651 232 161 SNP 1 G 1 A 100 35 35 A 100 35 ConsensusfromContig1932 302 285 SNP 1 A 2 A/C 57.1/42.9 20/15 35 A 57.14285714 20 C 42.85714286 15 ConsensusfromContig3271 243 227 SNP 1 T 1 A 77.1 27 35 A 77.14285714 27 ConsensusfromContig3840 273 240 SNP 1 A 1 C 97.1 34 35 C 97.14285714 34 ConsensusfromContig4019 22 22 SNP 1 A 1 C 80 28 35 C 80 28 ConsensusfromContig4049 562 377 SNP 1 C 1 T 91.4 32 35 T 91.42857143 32 ConsensusfromContig4114 60 43 SNP 1 A 1 G 100 35 35 G 100 35 ConsensusfromContig4573 252 181 SNP 1 A 1 C 100 35 35 C 100 35 ConsensusfromContig5019 152 132 SNP 1 A 2 A/G 54.3/45.7 19/16 35 A 54.28571429 19 G 45.71428571 16 ConsensusfromContig7409 87 87 SNP 1 A 1 G 97.1 34 35 G 97.14285714 34 ConsensusfromContig7514 22 11 SNP 1 C 1 T 74.3 26 35 T 74.28571429 26 ConsensusfromContig8301 550 232 SNP 1 C 1 T 97.1 34 35 T 97.14285714 34 ConsensusfromContig9100 305 224 SNP 1 T 1 G 100 35 35 G 100 35 ConsensusfromContig651 182 99 SNP 1 A 1 G 97.2 35 36 G 97.22222222 35 ConsensusfromContig786 331 256 SNP 1 T 1 C 88.9 32 36 C 88.88888889 32 ConsensusfromContig1525 330 277 SNP 1 C 2 C/T 52.8/47.2 19/17 36 C 52.77777778 19 T 47.22222222 17 ConsensusfromContig2024 434 434 SNP 1 G 1 A 100 36 36 A 100 36 ConsensusfromContig2048 559 519 SNP 1 A 1 C 100 36 36 C 100 36 ConsensusfromContig2211 218 213 SNP 1 A 2 A/T 52.8/47.2 19/17 36 A 52.77777778 19 T 47.22222222 17 ConsensusfromContig3110 388 352 SNP 1 A 2 A/G 61.1/38.9 22/14 36 A 61.11111111 22 G 38.88888889 14 ConsensusfromContig3229 21 6 SNP 1 G 1 A 97.2 35 36 A 97.22222222 35 ConsensusfromContig4522 97 44 SNP 1 C 1 T 100 36 36 T 100 36 ConsensusfromContig4571 306 262 SNP 1 G 1 A 66.7 24 36 A 66.66666667 24 ConsensusfromContig5172 90 43 SNP 1 G 1 T 75 27 36 T 75 27 ConsensusfromContig6100 444 205 SNP 1 A 1 G 77.8 28 36 G 77.77777778 28 ConsensusfromContig6570 106 106 SNP 1 C 2 T/C 58.3/41.7 21/15 36 T 58.33333333 21 C 41.66666667 15 ConsensusfromContig6704 238 220 SNP 1 C 2 T/C 52.8/47.2 19/17 36 T 52.77777778 19 C 47.22222222 17 ConsensusfromContig7246 272 227 SNP 1 C 1 T 100 36 36 T 100 36 ConsensusfromContig7542 132 94 SNP 1 C 1 T 88.9 32 36 T 88.88888889 32 ConsensusfromContig7810 347 335 SNP 1 T 1 C 100 36 36 C 100 36 ConsensusfromContig8155 184 12 SNP 1 G 1 T 97.2 35 36 T 97.22222222 35 ConsensusfromContig8520 20 20 SNP 1 A 1 C 77.8 28 36 C 77.77777778 28 ConsensusfromContig8705 105 83 SNP 1 C 1 T 100 36 36 T 100 36 ConsensusfromContig714 249 223 SNP 1 A 1 G 100 37 37 G 100 37 ConsensusfromContig1665 781 670 SNP 1 A 1 G 97.3 36 37 G 97.2972973 36 ConsensusfromContig2798 346 287 SNP 1 A 2 T/A 54.1/45.9 20/17 37 T 54.05405405 20 A 45.94594595 17 ConsensusfromContig2986 232 213 SNP 1 T 2 C/T 54.1/45.9 20/17 37 C 54.05405405 20 T 45.94594595 17 ConsensusfromContig3271 185 169 SNP 1 T 2 T/C 56.8/35.1 21/13 37 T 56.75675676 21 C 35.13513514 13 ConsensusfromContig3272 271 260 SNP 1 T 2 C/T 62.2/37.8 23/14 37 C 62.16216216 23 T 37.83783784 14 ConsensusfromContig3308 142 50 SNP 1 G 1 A 94.6 35 37 A 94.59459459 35 ConsensusfromContig3512 270 233 SNP 1 G 1 A 70.3 26 37 A 70.27027027 26 ConsensusfromContig3958 41 41 SNP 1 T 1 A 100 37 37 A 100 37 ConsensusfromContig4415 165 142 SNP 1 A 1 T 89.2 33 37 T 89.18918919 33 ConsensusfromContig4493 320 177 SNP 1 A 1 G 83.8 31 37 G 83.78378378 31 ConsensusfromContig5287 162 162 SNP 1 A 2 A/T 54.1/45.9 20/17 37 A 54.05405405 20 T 45.94594595 17 ConsensusfromContig6086 202 173 SNP 1 T 1 C 73 27 37 C 72.97297297 27 ConsensusfromContig6214 207 197 SNP 1 G 2 T/G 62.2/37.8 23/14 37 T 62.16216216 23 G 37.83783784 14 ConsensusfromContig7903 394 372 SNP 1 A 1 G 100 37 37 G 100 37 ConsensusfromContig7989 190 153 SNP 1 C 2 C/T 59.5/40.5 22/15 37 C 59.45945946 22 T 40.54054054 15 ConsensusfromContig8990 272 253 SNP 1 C 2 T/C 64.9/35.1 24/13 37 T 64.86486486 24 C 35.13513514 13 ConsensusfromContig937 95 81 SNP 1 C 1 T 65.8 25 38 T 65.78947368 25 ConsensusfromContig2530 597 343 SNP 1 G 1 A 100 38 38 A 100 38 ConsensusfromContig2557 22 14 SNP 1 T 2 T/C 57.9/42.1 22/16 38 T 57.89473684 22 C 42.10526316 16 ConsensusfromContig3225 49 37 SNP 1 A 2 A/G 52.6/42.1 20/16 38 A 52.63157895 20 G 42.10526316 16 ConsensusfromContig3291 162 105 SNP 1 A 2 A/C 52.6/47.4 20/18 38 A 52.63157895 20 C 47.36842105 18 ConsensusfromContig3335 123 113 SNP 1 G 2 A/G 50.0/50.0 19/19 38 A 50 19 G 50 19 ConsensusfromContig3773 250 242 SNP 1 G 2 G/C 60.5/39.5 23/15 38 G 60.52631579 23 C 39.47368421 15 ConsensusfromContig4118 27 27 SNP 1 A 2 A/G 52.6/47.4 20/18 38 A 52.63157895 20 G 47.36842105 18 ConsensusfromContig5636 365 365 SNP 1 A 1 G 76.3 29 38 G 76.31578947 29 ConsensusfromContig6183 461 446 SNP 1 A 1 G 97.4 37 38 G 97.36842105 37 ConsensusfromContig7692 335 219 SNP 1 T 1 G 52.6 20 38 G 52.63157895 20 ConsensusfromContig8075 489 321 SNP 1 G 1 C 65.8 25 38 C 65.78947368 25 ConsensusfromContig8087 152 107 SNP 1 C 1 G 89.5 34 38 G 89.47368421 34 ConsensusfromContig672 366 365 SNP 1 C 2 T/C 61.5/38.5 24/15 39 T 61.53846154 24 C 38.46153846 15 ConsensusfromContig828 76 73 SNP 1 T 1 C 100 39 39 C 100 39 ConsensusfromContig1418 445 435 SNP 1 C 2 C/A 51.3/48.7 20/19 39 C 51.28205128 20 A 48.71794872 19 ConsensusfromContig1954 77 56 SNP 1 A 1 G 71.8 28 39 G 71.79487179 28 ConsensusfromContig2227 108 108 SNP 1 C 2 T/C 53.8/46.2 21/18 39 T 53.84615385 21 C 46.15384615 18 ConsensusfromContig2317 30 22 SNP 1 G 2 A/G 56.4/43.6 22/17 39 A 56.41025641 22 G 43.58974359 17 ConsensusfromContig3291 163 106 SNP 1 G 2 G/C 51.3/48.7 20/19 39 G 51.28205128 20 C 48.71794872 19 ConsensusfromContig4152 223 181 SNP 1 T 2 C/T 56.4/43.6 22/17 39 C 56.41025641 22 T 43.58974359 17 ConsensusfromContig4229 451 355 SNP 1 T 1 G 69.2 27 39 G 69.23076923 27 ConsensusfromContig4782 722 690 SNP 1 C 2 C/G 53.8/46.2 21/18 39 C 53.84615385 21 G 46.15384615 18 ConsensusfromContig4898 37 37 SNP 1 A 2 A/C 56.4/43.6 22/17 39 A 56.41025641 22 C 43.58974359 17 ConsensusfromContig5119 202 165 SNP 1 T 1 G 76.9 30 39 G 76.92307692 30 ConsensusfromContig7152 106 100 SNP 1 C 1 T 100 39 39 T 100 39 ConsensusfromContig7179 37 18 SNP 1 C 2 T/C 53.8/46.2 21/18 39 T 53.84615385 21 C 46.15384615 18 ConsensusfromContig7888 624 590 SNP 1 A 1 G 100 39 39 G 100 39 ConsensusfromContig8003 321 310 SNP 1 A 1 T 71.8 28 39 T 71.79487179 28 ConsensusfromContig8895 172 172 SNP 1 C 1 T 66.7 26 39 T 66.66666667 26 ConsensusfromContig191 348 311 SNP 1 C 1 T 100 40 40 T 100 40 ConsensusfromContig261 121 121 SNP 1 C 1 T 97.5 39 40 T 97.5 39 ConsensusfromContig781 279 251 SNP 1 T 1 C 100 40 40 C 100 40 ConsensusfromContig1234 136 101 SNP 1 C 1 T 80 32 40 T 80 32 ConsensusfromContig3236 67 67 SNP 1 T 2 A/T 65.0/35.0 26/14 40 A 65 26 T 35 14 ConsensusfromContig3800 145 131 SNP 1 A 1 T 100 40 40 T 100 40 ConsensusfromContig4595 20 14 SNP 1 G 2 G/A 57.5/42.5 23/17 40 G 57.5 23 A 42.5 17 ConsensusfromContig4764 44 26 SNP 1 T 1 G 97.5 39 40 G 97.5 39 ConsensusfromContig5172 329 282 SNP 1 C 2 A/C 50.0/50.0 20/20 40 A 50 20 C 50 20 ConsensusfromContig7179 299 272 SNP 1 A 1 C 67.5 27 40 C 67.5 27 ConsensusfromContig8412 486 477 SNP 1 C 2 T/C 57.5/42.5 23/17 40 T 57.5 23 C 42.5 17 ConsensusfromContig1193 531 509 SNP 1 T 1 A 78 32 41 A 78.04878049 32 ConsensusfromContig3211 430 430 SNP 1 T 2 T/G 63.4/36.6 26/15 41 T 63.41463415 26 G 36.58536585 15 ConsensusfromContig3234 349 333 SNP 1 A 1 T 95.1 39 41 T 95.12195122 39 ConsensusfromContig3440 511 509 SNP 1 C 1 T 100 41 41 T 100 41 ConsensusfromContig3581 329 329 SNP 1 C 1 T 90.2 37 41 T 90.24390244 37 ConsensusfromContig4025 67 58 SNP 1 A 2 A/C 58.5/41.5 24/17 41 A 58.53658537 24 C 41.46341463 17 ConsensusfromContig5029 241 220 SNP 1 T 1 A 65.9 27 41 A 65.85365854 27 ConsensusfromContig5544 620 122 SNP 1 C 1 T 100 41 41 T 100 41 ConsensusfromContig5818 42 34 SNP 1 A 2 A/T 61.0/39.0 25/16 41 A 60.97560976 25 T 39.02439024 16 ConsensusfromContig5992 108 103 SNP 1 G 2 A/G 56.1/43.9 23/18 41 A 56.09756098 23 G 43.90243902 18 ConsensusfromContig7265 326 326 SNP 1 A 1 G 100 41 41 G 100 41 ConsensusfromContig7392 166 31 SNP 1 A 1 G 75.6 31 41 G 75.6097561 31 ConsensusfromContig8011 602 526 SNP 1 G 1 T 87.8 36 41 T 87.80487805 36 ConsensusfromContig9033 349 326 SNP 1 A 2 A/T 58.5/41.5 24/17 41 A 58.53658537 24 T 41.46341463 17 ConsensusfromContig292 401 401 SNP 1 C 1 T 100 42 42 T 100 42 ConsensusfromContig665 45 40 SNP 1 A 2 A/G 54.8/45.2 23/19 42 A 54.76190476 23 G 45.23809524 19 ConsensusfromContig1283 406 399 SNP 1 G 2 A/G 50.0/50.0 21/21 42 A 50 21 G 50 21 ConsensusfromContig2783 135 135 SNP 1 A 1 G 100 42 42 G 100 42 ConsensusfromContig3085 300 248 SNP 1 A 1 G 100 42 42 G 100 42 ConsensusfromContig3238 243 229 SNP 1 C 2 C/A 52.4/47.6 22/20 42 C 52.38095238 22 A 47.61904762 20 ConsensusfromContig3280 59 31 SNP 1 C 2 T/C 52.4/47.6 22/20 42 T 52.38095238 22 C 47.61904762 20 ConsensusfromContig5579 225 210 SNP 1 C 2 A/C 54.8/45.2 23/19 42 A 54.76190476 23 C 45.23809524 19 ConsensusfromContig5734 437 429 SNP 1 C 1 T 100 42 42 T 100 42 ConsensusfromContig6557 272 262 SNP 1 T 1 C 88.1 37 42 C 88.0952381 37 ConsensusfromContig7081 74 48 SNP 1 A 1 G 100 42 42 G 100 42 ConsensusfromContig7084 73 73 SNP 1 C 1 T 100 42 42 T 100 42 ConsensusfromContig7278 187 176 SNP 1 A 2 G/A 52.4/47.6 22/20 42 G 52.38095238 22 A 47.61904762 20 ConsensusfromContig8011 603 527 SNP 1 C 1 G 90.5 38 42 G 90.47619048 38 ConsensusfromContig8043 196 126 SNP 1 A 1 G 97.6 41 42 G 97.61904762 41 ConsensusfromContig8171 446 444 SNP 1 G 1 T 81 34 42 T 80.95238095 34 ConsensusfromContig8703 360 347 SNP 1 T 2 C/T 54.8/45.2 23/19 42 C 54.76190476 23 T 45.23809524 19 ConsensusfromContig412 205 195 SNP 1 G 1 T 100 43 43 T 100 43 ConsensusfromContig937 96 82 SNP 1 A 2 G/A 62.8/37.2 27/16 43 G 62.79069767 27 A 37.20930233 16 ConsensusfromContig1759 245 207 SNP 1 G 2 A/G 51.2/48.8 22/21 43 A 51.1627907 22 G 48.8372093 21 ConsensusfromContig2470 126 101 SNP 1 C 1 T 100 43 43 T 100 43 ConsensusfromContig2803 70 31 SNP 1 A 1 T 88.4 38 43 T 88.37209302 38 ConsensusfromContig3229 22 7 SNP 1 T 1 C 100 43 43 C 100 43 ConsensusfromContig3299 245 245 SNP 1 A 2 A/C 60.5/37.2 26/16 43 A 60.46511628 26 C 37.20930233 16 ConsensusfromContig3553 71 71 SNP 1 A 1 G 100 43 43 G 100 43 ConsensusfromContig3865 446 421 SNP 1 G 1 A 100 43 43 A 100 43 ConsensusfromContig4668 137 137 SNP 1 A 1 T 97.7 42 43 T 97.6744186 42 ConsensusfromContig6263 377 375 SNP 1 G 2 G/A 58.1/41.9 25/18 43 G 58.13953488 25 A 41.86046512 18 ConsensusfromContig6565 238 188 SNP 1 A 2 A/G 53.5/46.5 23/20 43 A 53.48837209 23 G 46.51162791 20 ConsensusfromContig6662 565 291 SNP 1 T 2 T/G 62.8/37.2 27/16 43 T 62.79069767 27 G 37.20930233 16 ConsensusfromContig7084 71 71 SNP 1 C 1 A 100 43 43 A 100 43 ConsensusfromContig7810 389 377 SNP 1 T 2 T/C 51.2/48.8 22/21 43 T 51.1627907 22 C 48.8372093 21 ConsensusfromContig8208 431 411 SNP 1 C 1 T 81.4 35 43 T 81.39534884 35 ConsensusfromContig8705 290 264 SNP 1 A 1 T 100 43 43 T 100 43 ConsensusfromContig266 259 254 SNP 1 A 2 A/G 59.1/40.9 26/18 44 A 59.09090909 26 G 40.90909091 18 ConsensusfromContig1474 582 502 SNP 1 C 2 C/T 59.1/40.9 26/18 44 C 59.09090909 26 T 40.90909091 18 ConsensusfromContig2437 214 210 SNP 1 C 2 C/T 56.8/43.2 25/19 44 C 56.81818182 25 T 43.18181818 19 ConsensusfromContig2658 86 74 SNP 1 G 2 A/G 56.8/43.2 25/19 44 A 56.81818182 25 G 43.18181818 19 ConsensusfromContig3039 245 230 SNP 1 A 2 C/A 54.5/45.5 24/20 44 C 54.54545455 24 A 45.45454545 20 ConsensusfromContig3203 345 337 SNP 1 A 1 G 97.7 43 44 G 97.72727273 43 ConsensusfromContig3234 254 238 SNP 1 A 2 A/G 50.0/50.0 22/22 44 A 50 22 G 50 22 ConsensusfromContig3373 216 119 SNP 1 A 1 T 93.2 41 44 T 93.18181818 41 ConsensusfromContig3464 114 114 SNP 1 T 2 T/C 61.4/38.6 27/17 44 T 61.36363636 27 C 38.63636364 17 ConsensusfromContig5734 38 30 SNP 1 T 2 T/A 59.1/40.9 26/18 44 T 59.09090909 26 A 40.90909091 18 ConsensusfromContig5983 25 14 SNP 1 G 1 A 100 44 44 A 100 44 ConsensusfromContig6570 77 77 SNP 1 G 2 G/T 59.1/40.9 26/18 44 G 59.09090909 26 T 40.90909091 18 ConsensusfromContig6856 690 643 SNP 1 G 1 A 100 44 44 A 100 44 ConsensusfromContig7727 533 491 SNP 1 C 1 G 93.2 41 44 G 93.18181818 41 ConsensusfromContig8895 104 104 SNP 1 A 2 G/A 56.8/40.9 25/18 44 G 56.81818182 25 A 40.90909091 18 ConsensusfromContig1216 583 482 SNP 1 G 2 T/G 57.8/42.2 26/19 45 T 57.77777778 26 G 42.22222222 19 ConsensusfromContig2483 28 28 SNP 1 A 1 G 100 45 45 G 100 45 ConsensusfromContig3130 80 80 SNP 1 A 1 T 100 45 45 T 100 45 ConsensusfromContig3360 296 296 SNP 1 G 1 A 93.3 42 45 A 93.33333333 42 ConsensusfromContig3872 390 346 SNP 1 C 1 T 100 45 45 T 100 45 ConsensusfromContig5700 34 34 SNP 1 C 1 T 84.4 38 45 T 84.44444444 38 ConsensusfromContig5812 107 107 SNP 1 A 2 G/A 51.1/48.9 23/22 45 G 51.11111111 23 A 48.88888889 22 ConsensusfromContig5874 189 161 SNP 1 C 1 G 100 45 45 G 100 45 ConsensusfromContig6704 358 340 SNP 1 A 1 G 71.1 32 45 G 71.11111111 32 ConsensusfromContig7209 398 381 SNP 1 A 1 T 100 45 45 T 100 45 ConsensusfromContig7456 6 6 SNP 1 C 2 C/G 62.2/37.8 28/17 45 C 62.22222222 28 G 37.77777778 17 ConsensusfromContig7502 191 155 SNP 1 A 2 C/A 62.2/37.8 28/17 45 C 62.22222222 28 A 37.77777778 17 ConsensusfromContig7937 147 132 SNP 1 A 2 A/G 57.8/42.2 26/19 45 A 57.77777778 26 G 42.22222222 19 ConsensusfromContig8624 74 68 SNP 1 A 2 A/T 51.1/48.9 23/22 45 A 51.11111111 23 T 48.88888889 22 ConsensusfromContig407 52 52 SNP 1 T 1 C 80.4 37 46 C 80.43478261 37 ConsensusfromContig426 279 236 SNP 1 A 1 C 82.6 38 46 C 82.60869565 38 ConsensusfromContig1529 111 89 SNP 1 C 1 T 97.8 45 46 T 97.82608696 45 ConsensusfromContig2557 83 74 SNP 1 T 2 T/C 63.0/37.0 29/17 46 T 63.04347826 29 C 36.95652174 17 ConsensusfromContig3036 185 155 SNP 1 A 2 G/A 60.9/39.1 28/18 46 G 60.86956522 28 A 39.13043478 18 ConsensusfromContig3038 160 160 SNP 1 T 2 T/C 52.2/47.8 24/22 46 T 52.17391304 24 C 47.82608696 22 ConsensusfromContig4668 372 366 SNP 1 C 1 T 100 46 46 T 100 46 ConsensusfromContig8990 113 97 SNP 1 C 1 T 71.7 33 46 T 71.73913043 33 ConsensusfromContig491 125 125 SNP 1 G 2 A/G 55.3/44.7 26/21 47 A 55.31914894 26 G 44.68085106 21 ConsensusfromContig1264 196 189 SNP 1 T 2 T/C 57.4/42.6 27/20 47 T 57.44680851 27 C 42.55319149 20 ConsensusfromContig2001 506 467 SNP 1 C 1 T 100 47 47 T 100 47 ConsensusfromContig2010 413 413 SNP 1 A 2 A/C 61.7/38.3 29/18 47 A 61.70212766 29 C 38.29787234 18 ConsensusfromContig2034 418 399 SNP 1 T 2 T/C 63.8/36.2 30/17 47 T 63.82978723 30 C 36.17021277 17 ConsensusfromContig4049 484 299 SNP 1 C 2 C/G 59.6/40.4 28/19 47 C 59.57446809 28 G 40.42553191 19 ConsensusfromContig339 41 41 SNP 1 T 2 C/T 54.2/45.8 26/22 48 C 54.16666667 26 T 45.83333333 22 ConsensusfromContig380 353 241 SNP 1 T 1 C 100 48 48 C 100 48 ConsensusfromContig773 42 16 SNP 1 A 1 G 72.9 35 48 G 72.91666667 35 ConsensusfromContig1296 122 116 SNP 1 C 1 A 100 48 48 A 100 48 ConsensusfromContig1783 47 25 SNP 1 G 1 T 79.2 38 48 T 79.16666667 38 ConsensusfromContig3344 72 64 SNP 1 G 2 G/T 62.5/37.5 30/18 48 G 62.5 30 T 37.5 18 ConsensusfromContig4019 390 390 SNP 1 C 1 T 100 48 48 T 100 48 ConsensusfromContig4203 482 327 SNP 1 A 1 C 97.9 47 48 C 97.91666667 47 ConsensusfromContig5874 331 302 SNP 1 A 2 A/G 60.4/39.6 29/19 48 A 60.41666667 29 G 39.58333333 19 ConsensusfromContig8640 14 14 SNP 1 C 2 G/C 54.2/45.8 26/22 48 G 54.16666667 26 C 45.83333333 22 ConsensusfromContig672 153 152 SNP 1 A 1 G 67.3 33 49 G 67.34693878 33 ConsensusfromContig1625 124 119 SNP 1 C 1 A 77.6 38 49 A 77.55102041 38 ConsensusfromContig1660 372 178 SNP 1 G 1 C 100 49 49 C 100 49 ConsensusfromContig2034 403 384 SNP 1 A 2 A/G 57.1/42.9 28/21 49 A 57.14285714 28 G 42.85714286 21 ConsensusfromContig2523 186 180 SNP 1 C 1 T 100 49 49 T 100 49 ConsensusfromContig3187 467 370 SNP 1 T 1 C 75.5 37 49 C 75.51020408 37 ConsensusfromContig3219 35 19 SNP 1 T 2 C/T 59.2/40.8 29/20 49 C 59.18367347 29 T 40.81632653 20 ConsensusfromContig3680 223 223 SNP 1 A 2 A/C 55.1/44.9 27/22 49 A 55.10204082 27 C 44.89795918 22 ConsensusfromContig4619 94 94 SNP 1 T 2 C/T 57.1/42.9 28/21 49 C 57.14285714 28 T 42.85714286 21 ConsensusfromContig270 233 200 SNP 1 C 1 T 100 50 50 T 100 50 ConsensusfromContig1557 328 249 SNP 1 A 2 A/G 64.0/36.0 32/18 50 A 64 32 G 36 18 ConsensusfromContig1948 169 167 SNP 1 C 1 T 100 50 50 T 100 50 ConsensusfromContig2034 71 62 SNP 1 C 2 C/T 56.0/44.0 28/22 50 C 56 28 T 44 22 ConsensusfromContig2211 88 88 SNP 1 C 1 T 70 35 50 T 70 35 ConsensusfromContig2681 260 157 SNP 1 C 1 T 80 40 50 T 80 40 ConsensusfromContig3335 61 51 SNP 1 G 1 T 82 41 50 T 82 41 ConsensusfromContig3389 24 24 SNP 1 C 2 A/C 36.0/36.0 18/18 50 A 36 18 C 36 18 ConsensusfromContig3906 71 64 SNP 1 T 1 C 96 48 50 C 96 48 ConsensusfromContig5119 218 181 SNP 1 A 1 T 68 34 50 T 68 34 ConsensusfromContig5616 417 411 SNP 1 C 2 A/C 58.0/42.0 29/21 50 A 58 29 C 42 21 ConsensusfromContig6258 347 347 SNP 1 C 2 C/A 58.0/42.0 29/21 50 C 58 29 A 42 21 ConsensusfromContig7084 158 158 SNP 1 A 2 A/G 64.0/36.0 32/18 50 A 64 32 G 36 18 ConsensusfromContig7278 163 152 SNP 1 C 2 T/C 62.0/38.0 31/19 50 T 62 31 C 38 19 ConsensusfromContig7694 177 177 SNP 1 G 1 A 86 43 50 A 86 43 ConsensusfromContig8064 23 21 SNP 1 C 2 G/C 62.0/38.0 31/19 50 G 62 31 C 38 19 ConsensusfromContig2622 194 194 SNP 1 A 2 A/C 60.8/39.2 31/20 51 A 60.78431373 31 C 39.21568627 20 ConsensusfromContig3039 229 214 SNP 1 T 2 C/T 56.9/43.1 29/22 51 C 56.8627451 29 T 43.1372549 22 ConsensusfromContig3701 175 172 SNP 1 A 1 C 100 51 51 C 100 51 ConsensusfromContig8011 684 608 SNP 1 A 2 A/G 60.8/39.2 31/20 51 A 60.78431373 31 G 39.21568627 20 ConsensusfromContig205 95 95 SNP 1 T 2 T/C 61.5/38.5 32/20 52 T 61.53846154 32 C 38.46153846 20 ConsensusfromContig3228 286 286 SNP 1 C 1 T 96.2 50 52 T 96.15384615 50 ConsensusfromContig8482 289 232 SNP 1 A 1 G 65.4 34 52 G 65.38461538 34 ConsensusfromContig8640 188 188 SNP 1 A 2 A/G 57.7/42.3 30/22 52 A 57.69230769 30 G 42.30769231 22 ConsensusfromContig8652 22 22 SNP 1 T 2 T/A 57.7/42.3 30/22 52 T 57.69230769 30 A 42.30769231 22 ConsensusfromContig343 48 44 SNP 1 T 2 T/G 60.4/39.6 32/21 53 T 60.37735849 32 G 39.62264151 21 ConsensusfromContig584 243 215 SNP 1 G 1 A 77.4 41 53 A 77.35849057 41 ConsensusfromContig628 159 114 SNP 1 C 1 T 100 53 53 T 100 53 ConsensusfromContig2211 203 198 SNP 1 G 2 T/G 52.8/47.2 28/25 53 T 52.83018868 28 G 47.16981132 25 ConsensusfromContig2641 429 269 SNP 1 G 2 G/A 52.8/47.2 28/25 53 G 52.83018868 28 A 47.16981132 25 ConsensusfromContig2696 765 726 SNP 1 G 1 T 100 53 53 T 100 53 ConsensusfromContig3234 268 252 SNP 1 T 2 C/T 52.8/47.2 28/25 53 C 52.83018868 28 T 47.16981132 25 ConsensusfromContig3621 169 165 SNP 1 G 2 G/A 62.3/37.7 33/20 53 G 62.26415094 33 A 37.73584906 20 ConsensusfromContig4799 288 276 SNP 1 T 2 T/C 58.5/41.5 31/22 53 T 58.49056604 31 C 41.50943396 22 ConsensusfromContig5019 166 146 SNP 1 C 2 G/C 54.7/45.3 29/24 53 G 54.71698113 29 C 45.28301887 24 ConsensusfromContig7529 563 561 SNP 1 C 2 C/T 62.3/37.7 33/20 53 C 62.26415094 33 T 37.73584906 20 ConsensusfromContig7740 458 373 SNP 1 A 2 G/A 50.9/49.1 27/26 53 G 50.94339623 27 A 49.05660377 26 ConsensusfromContig7986 302 299 SNP 1 C 1 T 100 53 53 T 100 53 ConsensusfromContig8620 228 197 SNP 1 A 2 T/A 62.3/37.7 33/20 53 T 62.26415094 33 A 37.73584906 20 ConsensusfromContig8635 124 124 SNP 1 A 1 G 98.1 52 53 G 98.11320755 52 ConsensusfromContig230 68 68 SNP 1 G 1 A 77.8 42 54 A 77.77777778 42 ConsensusfromContig738 248 188 SNP 1 A 1 T 98.1 53 54 T 98.14814815 53 ConsensusfromContig2713 78 46 SNP 1 A 1 G 92.6 50 54 G 92.59259259 50 ConsensusfromContig3219 75 59 SNP 1 C 2 C/A 64.8/35.2 35/19 54 C 64.81481481 35 A 35.18518519 19 ConsensusfromContig4025 85 76 SNP 1 A 2 C/A 63.0/37.0 34/20 54 C 62.96296296 34 A 37.03703704 20 ConsensusfromContig4332 146 109 SNP 1 C 2 C/G 53.7/46.3 29/25 54 C 53.7037037 29 G 46.2962963 25 ConsensusfromContig5160 591 567 SNP 1 C 2 C/T 53.7/46.3 29/25 54 C 53.7037037 29 T 46.2962963 25 ConsensusfromContig5636 266 266 SNP 1 A 1 G 66.7 36 54 G 66.66666667 36 ConsensusfromContig6529 135 125 SNP 1 G 1 T 98.1 53 54 T 98.14814815 53 ConsensusfromContig7113 334 193 SNP 1 T 1 A 87 47 54 A 87.03703704 47 ConsensusfromContig7153 158 147 SNP 1 T 2 T/C 61.1/38.9 33/21 54 T 61.11111111 33 C 38.88888889 21 ConsensusfromContig8088 87 60 SNP 1 C 1 T 100 54 54 T 100 54 ConsensusfromContig8191 612 296 SNP 1 A 2 C/A 64.8/35.2 35/19 54 C 64.81481481 35 A 35.18518519 19 ConsensusfromContig8811 90 90 SNP 1 G 2 G/A 64.8/35.2 35/19 54 G 64.81481481 35 A 35.18518519 19 ConsensusfromContig8903 104 104 SNP 1 G 2 G/C 55.6/44.4 30/24 54 G 55.55555556 30 C 44.44444444 24 ConsensusfromContig230 197 197 SNP 1 G 1 T 87.3 48 55 T 87.27272727 48 ConsensusfromContig339 44 44 SNP 1 C 2 G/C 58.2/41.8 32/23 55 G 58.18181818 32 C 41.81818182 23 ConsensusfromContig1418 55 55 SNP 1 G 2 A/G 63.6/36.4 35/20 55 A 63.63636364 35 G 36.36363636 20 ConsensusfromContig1625 151 146 SNP 1 G 1 C 81.8 45 55 C 81.81818182 45 ConsensusfromContig1932 136 122 SNP 1 G 2 G/A 54.5/45.5 30/25 55 G 54.54545455 30 A 45.45454545 25 ConsensusfromContig3377 595 546 SNP 1 G 2 G/A 61.8/38.2 34/21 55 G 61.81818182 34 A 38.18181818 21 ConsensusfromContig4332 182 145 SNP 1 C 1 T 69.1 38 55 T 69.09090909 38 ConsensusfromContig4903 453 453 SNP 1 G 1 A 100 55 55 A 100 55 ConsensusfromContig5274 321 296 SNP 1 C 2 T/C 58.2/41.8 32/23 55 T 58.18181818 32 C 41.81818182 23 ConsensusfromContig5511 265 221 SNP 1 C 1 T 100 55 55 T 100 55 ConsensusfromContig6482 208 169 SNP 1 C 2 C/T 58.2/41.8 32/23 55 C 58.18181818 32 T 41.81818182 23 ConsensusfromContig6631 194 67 SNP 1 T 2 T/C 60.0/36.4 33/20 55 T 60 33 C 36.36363636 20 ConsensusfromContig665 64 59 SNP 1 T 2 C/T 55.4/44.6 31/25 56 C 55.35714286 31 T 44.64285714 25 ConsensusfromContig1557 355 276 SNP 1 T 2 T/A 60.7/39.3 34/22 56 T 60.71428571 34 A 39.28571429 22 ConsensusfromContig3280 132 104 SNP 1 C 1 T 98.2 55 56 T 98.21428571 55 ConsensusfromContig3572 266 176 SNP 1 A 2 A/C 64.3/35.7 36/20 56 A 64.28571429 36 C 35.71428571 20 ConsensusfromContig3578 144 133 SNP 1 G 1 C 73.2 41 56 C 73.21428571 41 ConsensusfromContig3880 276 132 SNP 1 T 1 C 100 56 56 C 100 56 ConsensusfromContig5172 201 154 SNP 1 A 2 A/G 57.1/42.9 32/24 56 A 57.14285714 32 G 42.85714286 24 ConsensusfromContig5677 57 57 SNP 1 A 2 A/G 60.7/39.3 34/22 56 A 60.71428571 34 G 39.28571429 22 ConsensusfromContig6360 152 125 SNP 1 A 2 A/T 60.7/39.3 34/22 56 A 60.71428571 34 T 39.28571429 22 ConsensusfromContig7048 365 359 SNP 1 C 2 C/A 64.3/35.7 36/20 56 C 64.28571429 36 A 35.71428571 20 ConsensusfromContig8011 795 719 SNP 1 A 2 A/G 60.7/39.3 34/22 56 A 60.71428571 34 G 39.28571429 22 ConsensusfromContig8197 221 217 SNP 1 C 1 A 100 56 56 A 100 56 ConsensusfromContig80 155 150 SNP 1 C 1 T 98.2 56 57 T 98.24561404 56 ConsensusfromContig3272 73 62 SNP 1 A 2 A/T 63.2/36.8 36/21 57 A 63.15789474 36 T 36.84210526 21 ConsensusfromContig4297 47 38 SNP 1 T 2 T/C 61.4/38.6 35/22 57 T 61.40350877 35 C 38.59649123 22 ConsensusfromContig4332 183 146 SNP 1 A 1 C 71.9 41 57 C 71.92982456 41 ConsensusfromContig6498 110 103 SNP 1 C 1 A 71.9 41 57 A 71.92982456 41 ConsensusfromContig8145 381 362 SNP 1 G 1 A 91.2 52 57 A 91.22807018 52 ConsensusfromContig8825 42 42 SNP 1 C 1 T 56.1 32 57 T 56.14035088 32 ConsensusfromContig462 167 167 SNP 1 T 2 C/T 53.4/46.6 31/27 58 C 53.44827586 31 T 46.55172414 27 ConsensusfromContig832 440 409 SNP 1 N 1 A 100 58 58 A 100 58 ConsensusfromContig875 55 22 SNP 1 G 1 A 82.8 48 58 A 82.75862069 48 ConsensusfromContig1187 748 628 SNP 1 T 2 G/T 53.4/46.6 31/27 58 G 53.44827586 31 T 46.55172414 27 ConsensusfromContig1428 150 149 SNP 1 T 1 C 98.3 57 58 C 98.27586207 57 ConsensusfromContig1678 515 514 SNP 1 G 1 T 86.2 50 58 T 86.20689655 50 ConsensusfromContig7013 298 298 SNP 1 A 1 G 100 58 58 G 100 58 ConsensusfromContig7295 82 55 SNP 1 C 1 G 67.2 39 58 G 67.24137931 39 ConsensusfromContig7609 104 94 SNP 1 C 1 T 100 58 58 T 100 58 ConsensusfromContig8943 185 185 SNP 1 G 2 G/A 63.8/36.2 37/21 58 G 63.79310345 37 A 36.20689655 21 ConsensusfromContig3228 287 287 SNP 1 G 1 T 86.4 51 59 T 86.44067797 51 ConsensusfromContig4114 295 278 SNP 1 C 1 T 72.9 43 59 T 72.88135593 43 ConsensusfromContig4960 323 303 SNP 1 C 1 T 100 59 59 T 100 59 ConsensusfromContig5617 247 239 SNP 1 T 1 C 74.6 44 59 C 74.57627119 44 ConsensusfromContig6233 278 276 SNP 1 A 2 G/A 64.4/35.6 38/21 59 G 64.40677966 38 A 35.59322034 21 ConsensusfromContig6360 159 132 SNP 1 C 1 T 100 59 59 T 100 59 ConsensusfromContig7409 101 101 SNP 1 T 1 A 98.3 58 59 A 98.30508475 58 ConsensusfromContig7670 264 197 SNP 1 A 1 C 84.7 50 59 C 84.74576271 50 ConsensusfromContig8811 162 162 SNP 1 G 1 A 69.5 41 59 A 69.49152542 41 ConsensusfromContig1182 373 320 SNP 1 T 1 C 66.7 40 60 C 66.66666667 40 ConsensusfromContig1734 60 54 SNP 1 C 1 A 83.3 50 60 A 83.33333333 50 ConsensusfromContig1932 148 134 SNP 1 C 2 C/T 61.7/38.3 37/23 60 C 61.66666667 37 T 38.33333333 23 ConsensusfromContig3203 344 336 SNP 1 C 1 T 85 51 60 T 85 51 ConsensusfromContig3389 78 78 SNP 1 C 1 T 53.3 32 60 T 53.33333333 32 ConsensusfromContig4114 392 375 SNP 1 A 2 G/A 61.7/38.3 37/23 60 G 61.66666667 37 A 38.33333333 23 ConsensusfromContig6258 399 399 SNP 1 G 1 A 71.7 43 60 A 71.66666667 43 ConsensusfromContig8011 789 713 SNP 1 C 2 T/C 56.7/43.3 34/26 60 T 56.66666667 34 C 43.33333333 26 ConsensusfromContig9108 331 155 SNP 1 A 1 G 100 60 60 G 100 60 ConsensusfromContig387 182 115 SNP 1 G 1 A 100 61 61 A 100 61 ConsensusfromContig1182 430 377 SNP 1 T 2 T/C 52.5/47.5 32/29 61 T 52.45901639 32 C 47.54098361 29 ConsensusfromContig1193 416 404 SNP 1 T 1 C 72.1 44 61 C 72.13114754 44 ConsensusfromContig2641 765 605 SNP 1 C 1 T 72.1 44 61 T 72.13114754 44 ConsensusfromContig2759 244 228 SNP 1 G 1 A 77 47 61 A 77.04918033 47 ConsensusfromContig3130 159 159 SNP 1 C 2 C/T 62.3/37.7 38/23 61 C 62.29508197 38 T 37.70491803 23 ConsensusfromContig3203 130 122 SNP 1 A 1 C 98.4 60 61 C 98.36065574 60 ConsensusfromContig3238 213 199 SNP 1 G 2 G/C 60.7/39.3 37/24 61 G 60.6557377 37 C 39.3442623 24 ConsensusfromContig6667 67 52 SNP 1 T 1 A 96.7 59 61 A 96.72131148 59 ConsensusfromContig604 436 405 SNP 1 A 1 T 100 62 62 T 100 62 ConsensusfromContig2211 245 240 SNP 1 A 1 G 80.6 50 62 G 80.64516129 50 ConsensusfromContig3272 202 191 SNP 1 A 2 A/T 62.9/35.5 39/22 62 A 62.90322581 39 T 35.48387097 22 ConsensusfromContig3360 328 328 SNP 1 C 2 C/T 64.5/35.5 40/22 62 C 64.51612903 40 T 35.48387097 22 ConsensusfromContig4114 397 380 SNP 1 C 2 C/T 62.9/37.1 39/23 62 C 62.90322581 39 T 37.09677419 23 ConsensusfromContig5816 10 10 SNP 1 A 2 A/C 58.1/41.9 36/26 62 A 58.06451613 36 C 41.93548387 26 ConsensusfromContig7670 263 196 SNP 1 A 1 G 85.5 53 62 G 85.48387097 53 ConsensusfromContig2295 429 429 SNP 1 C 1 T 100 63 63 T 100 63 ConsensusfromContig3130 191 191 SNP 1 A 1 G 68.3 43 63 G 68.25396825 43 ConsensusfromContig5985 322 250 SNP 1 A 1 G 79.4 50 63 G 79.36507937 50 ConsensusfromContig6570 95 95 SNP 1 G 2 G/T 61.9/38.1 39/24 63 G 61.9047619 39 T 38.0952381 24 ConsensusfromContig8703 384 371 SNP 1 A 2 G/A 58.7/39.7 37/25 63 G 58.73015873 37 A 39.68253968 25 ConsensusfromContig8969 508 508 SNP 1 A 1 G 98.4 62 63 G 98.41269841 62 ConsensusfromContig660 268 239 SNP 1 T 1 C 75 48 64 C 75 48 ConsensusfromContig672 144 143 SNP 1 G 2 A/G 64.1/35.9 41/23 64 A 64.0625 41 G 35.9375 23 ConsensusfromContig3744 399 366 SNP 1 C 1 T 96.9 62 64 T 96.875 62 ConsensusfromContig3998 186 186 SNP 1 T 2 T/A 59.4/40.6 38/26 64 T 59.375 38 A 40.625 26 ConsensusfromContig6704 159 141 SNP 1 T 2 T/G 54.7/45.3 35/29 64 T 54.6875 35 G 45.3125 29 ConsensusfromContig7048 357 351 SNP 1 A 2 A/T 64.1/35.9 41/23 64 A 64.0625 41 T 35.9375 23 ConsensusfromContig8698 375 360 SNP 1 A 1 G 98.4 63 64 G 98.4375 63 ConsensusfromContig8825 103 103 SNP 1 A 1 C 89.1 57 64 C 89.0625 57 ConsensusfromContig4037 280 280 SNP 1 G 2 T/G 55.4/44.6 36/29 65 T 55.38461538 36 G 44.61538462 29 ConsensusfromContig4203 184 63 SNP 1 A 1 G 100 65 65 G 100 65 ConsensusfromContig5135 186 161 SNP 1 T 2 T/A 64.6/35.4 42/23 65 T 64.61538462 42 A 35.38461538 23 ConsensusfromContig5205 236 230 SNP 1 C 2 A/C 55.4/44.6 36/29 65 A 55.38461538 36 C 44.61538462 29 ConsensusfromContig6041 13 6 SNP 1 T 1 C 100 65 65 C 100 65 ConsensusfromContig7516 632 585 SNP 1 N 1 A 100 65 65 A 100 65 ConsensusfromContig773 221 195 SNP 1 G 2 A/G 53.0/47.0 35/31 66 A 53.03030303 35 G 46.96969697 31 ConsensusfromContig6127 83 52 SNP 1 G 1 A 69.7 46 66 A 69.6969697 46 ConsensusfromContig7048 142 136 SNP 1 T 1 C 72.7 48 66 C 72.72727273 48 ConsensusfromContig7487 154 153 SNP 1 C 2 C/T 54.5/45.5 36/30 66 C 54.54545455 36 T 45.45454545 30 ConsensusfromContig8635 128 128 SNP 1 A 1 G 66.7 44 66 G 66.66666667 44 ConsensusfromContig8652 23 23 SNP 1 A 1 G 63.6 42 66 G 63.63636364 42 ConsensusfromContig1187 751 631 SNP 1 C 2 C/T 55.2/44.8 37/30 67 C 55.2238806 37 T 44.7761194 30 ConsensusfromContig2211 70 70 SNP 1 G 2 A/G 59.7/40.3 40/27 67 A 59.70149254 40 G 40.29850746 27 ConsensusfromContig2364 311 239 SNP 1 T 1 A 91 61 67 A 91.04477612 61 ConsensusfromContig2776 89 61 SNP 1 C 1 T 95.5 64 67 T 95.52238806 64 ConsensusfromContig6570 14 14 SNP 1 G 2 G/A 59.7/40.3 40/27 67 G 59.70149254 40 A 40.29850746 27 ConsensusfromContig8811 114 114 SNP 1 T 2 C/T 58.2/40.3 39/27 67 C 58.20895522 39 T 40.29850746 27 ConsensusfromContig554 316 287 SNP 1 T 2 T/C 52.9/47.1 36/32 68 T 52.94117647 36 C 47.05882353 32 ConsensusfromContig1361 191 161 SNP 1 G 2 G/A 60.3/39.7 41/27 68 G 60.29411765 41 A 39.70588235 27 ConsensusfromContig1693 429 429 SNP 1 A 1 T 100 68 68 T 100 68 ConsensusfromContig2108 191 112 SNP 1 T 1 C 100 68 68 C 100 68 ConsensusfromContig2641 608 448 SNP 1 C 1 T 100 68 68 T 100 68 ConsensusfromContig6258 288 288 SNP 1 G 2 G/A 58.8/41.2 40/28 68 G 58.82352941 40 A 41.17647059 28 ConsensusfromContig6258 362 362 SNP 1 A 2 A/G 54.4/45.6 37/31 68 A 54.41176471 37 G 45.58823529 31 ConsensusfromContig569 44 27 SNP 1 C 1 T 98.6 68 69 T 98.55072464 68 ConsensusfromContig771 399 397 SNP 1 G 2 G/C 50.7/49.3 35/34 69 G 50.72463768 35 C 49.27536232 34 ConsensusfromContig3451 186 42 SNP 1 C 1 T 79.7 55 69 T 79.71014493 55 ConsensusfromContig6623 311 276 SNP 1 A 1 G 79.7 55 69 G 79.71014493 55 ConsensusfromContig7082 90 71 SNP 1 T 1 C 100 69 69 C 100 69 ConsensusfromContig7516 620 573 SNP 1 G 1 A 100 69 69 A 100 69 ConsensusfromContig7610 285 145 SNP 1 A 1 G 100 69 69 G 100 69 ConsensusfromContig665 165 160 SNP 1 C 1 T 100 70 70 T 100 70 ConsensusfromContig3014 38 38 SNP 1 T 2 T/C 61.4/38.6 43/27 70 T 61.42857143 43 C 38.57142857 27 ConsensusfromContig3219 186 170 SNP 1 G 2 T/G 54.3/45.7 38/32 70 T 54.28571429 38 G 45.71428571 32 ConsensusfromContig3578 432 419 SNP 1 G 1 A 97.1 68 70 A 97.14285714 68 ConsensusfromContig6263 356 354 SNP 1 C 2 T/C 62.9/37.1 44/26 70 T 62.85714286 44 C 37.14285714 26 ConsensusfromContig8075 759 591 SNP 1 A 2 G/A 52.9/47.1 37/33 70 G 52.85714286 37 A 47.14285714 33 ConsensusfromContig8811 39 39 SNP 1 G 2 A/G 50.0/50.0 35/35 70 A 50 35 G 50 35 ConsensusfromContig244 193 172 SNP 1 A 2 A/T 53.5/46.5 38/33 71 A 53.52112676 38 T 46.47887324 33 ConsensusfromContig832 159 128 SNP 1 G 1 A 98.6 70 71 A 98.5915493 70 ConsensusfromContig3389 60 60 SNP 1 G 2 G/A 52.1/47.9 37/34 71 G 52.11267606 37 A 47.88732394 34 ConsensusfromContig5983 71 60 SNP 1 G 1 C 91.5 65 71 C 91.54929577 65 ConsensusfromContig6483 169 169 SNP 1 G 1 A 98.6 70 71 A 98.5915493 70 ConsensusfromContig7113 522 381 SNP 1 A 1 T 100 71 71 T 100 71 ConsensusfromContig8207 65 65 SNP 1 A 1 G 78.9 56 71 G 78.87323944 56 ConsensusfromContig8354 147 131 SNP 1 A 1 G 97.2 69 71 G 97.18309859 69 ConsensusfromContig2045 229 216 SNP 1 C 2 A/C 59.7/40.3 43/29 72 A 59.72222222 43 C 40.27777778 29 ConsensusfromContig2275 68 68 SNP 1 C 1 A 73.6 53 72 A 73.61111111 53 ConsensusfromContig7179 192 165 SNP 1 T 2 T/G 62.5/37.5 45/27 72 T 62.5 45 G 37.5 27 ConsensusfromContig7407 41 41 SNP 1 A 1 G 72.2 52 72 G 72.22222222 52 ConsensusfromContig7670 185 122 SNP 1 C 2 C/T 51.4/48.6 37/35 72 C 51.38888889 37 T 48.61111111 35 ConsensusfromContig8452 131 131 SNP 1 C 1 T 100 72 72 T 100 72 ConsensusfromContig244 190 169 SNP 1 T 2 T/C 50.7/49.3 37/36 73 T 50.68493151 37 C 49.31506849 36 ConsensusfromContig781 256 228 SNP 1 T 2 C/T 53.4/46.6 39/34 73 C 53.42465753 39 T 46.57534247 34 ConsensusfromContig2641 164 60 SNP 1 T 2 G/T 52.1/47.9 38/35 73 G 52.05479452 38 T 47.94520548 35 ConsensusfromContig3036 297 267 SNP 1 G 2 G/T 57.5/42.5 42/31 73 G 57.53424658 42 T 42.46575342 31 ConsensusfromContig7110 429 334 SNP 1 C 2 C/T 53.4/46.6 39/34 73 C 53.42465753 39 T 46.57534247 34 ConsensusfromContig8616 58 58 SNP 1 A 2 A/T 50.7/49.3 37/36 73 A 50.68493151 37 T 49.31506849 36 ConsensusfromContig8703 231 218 SNP 1 T 2 T/A 64.4/35.6 47/26 73 T 64.38356164 47 A 35.61643836 26 ConsensusfromContig8884 126 126 SNP 1 A 2 G/A 52.1/47.9 38/35 73 G 52.05479452 38 A 47.94520548 35 ConsensusfromContig665 142 137 SNP 1 C 2 C/T 63.5/36.5 47/27 74 C 63.51351351 47 T 36.48648649 27 ConsensusfromContig3451 187 43 SNP 1 C 1 T 98.6 73 74 T 98.64864865 73 ConsensusfromContig4756 341 303 SNP 1 T 1 C 75.7 56 74 C 75.67567568 56 ConsensusfromContig6022 164 133 SNP 1 A 1 C 98.6 73 74 C 98.64864865 73 ConsensusfromContig8865 79 79 SNP 1 C 1 T 70.3 52 74 T 70.27027027 52 ConsensusfromContig8969 384 384 SNP 1 G 1 T 100 74 74 T 100 74 ConsensusfromContig2005 60 60 SNP 1 C 2 T/C 52.0/46.7 39/35 75 T 52 39 C 46.66666667 35 ConsensusfromContig3036 294 264 SNP 1 T 2 T/C 57.3/42.7 43/32 75 T 57.33333333 43 C 42.66666667 32 ConsensusfromContig8678 206 171 SNP 1 A 2 G/A 54.7/45.3 41/34 75 G 54.66666667 41 A 45.33333333 34 ConsensusfromContig703 216 186 SNP 1 T 1 C 65.8 50 76 C 65.78947368 50 ConsensusfromContig4114 291 274 SNP 1 A 1 T 81.6 62 76 T 81.57894737 62 ConsensusfromContig6303 47 47 SNP 1 G 1 C 73.7 56 76 C 73.68421053 56 ConsensusfromContig6550 145 128 SNP 1 T 1 C 72.4 55 76 C 72.36842105 55 ConsensusfromContig602 171 162 SNP 1 G 1 A 85.7 66 77 A 85.71428571 66 ConsensusfromContig3315 410 347 SNP 1 T 2 T/C 54.5/45.5 42/35 77 T 54.54545455 42 C 45.45454545 35 ConsensusfromContig3377 481 432 SNP 1 C 1 G 76.6 59 77 G 76.62337662 59 ConsensusfromContig6446 202 202 SNP 1 C 2 T/C 50.6/49.4 39/38 77 T 50.64935065 39 C 49.35064935 38 ConsensusfromContig6702 241 211 SNP 1 A 1 C 77.9 60 77 C 77.92207792 60 ConsensusfromContig8452 130 130 SNP 1 A 1 G 100 77 77 G 100 77 ConsensusfromContig160 23 16 SNP 1 C 2 C/T 62.8/37.2 49/29 78 C 62.82051282 49 T 37.17948718 29 ConsensusfromContig594 125 106 SNP 1 C 1 T 97.4 76 78 T 97.43589744 76 ConsensusfromContig3280 518 469 SNP 1 C 1 G 67.9 53 78 G 67.94871795 53 ConsensusfromContig3943 296 296 SNP 1 C 1 T 98.7 77 78 T 98.71794872 77 ConsensusfromContig4513 324 324 SNP 1 G 1 A 100 78 78 A 100 78 ConsensusfromContig5943 111 111 SNP 1 T 1 A 84.6 66 78 A 84.61538462 66 ConsensusfromContig6010 43 43 SNP 1 G 1 A 98.7 77 78 A 98.71794872 77 ConsensusfromContig8993 217 126 SNP 1 C 1 T 98.7 77 78 T 98.71794872 77 ConsensusfromContig3468 249 249 SNP 1 T 1 C 100 79 79 C 100 79 ConsensusfromContig5091 474 437 SNP 1 C 2 T/C 60.8/39.2 48/31 79 T 60.75949367 48 C 39.24050633 31 ConsensusfromContig6704 152 134 SNP 1 A 2 A/T 57.0/43.0 45/34 79 A 56.96202532 45 T 43.03797468 34 ConsensusfromContig7411 33 30 SNP 1 G 2 G/A 64.6/35.4 51/28 79 G 64.55696203 51 A 35.44303797 28 ConsensusfromContig1647 73 72 SNP 1 G 2 A/G 58.8/41.2 47/33 80 A 58.75 47 G 41.25 33 ConsensusfromContig3373 185 88 SNP 1 G 1 C 71.2 57 80 C 71.25 57 ConsensusfromContig4297 77 68 SNP 1 C 2 C/G 56.2/43.8 45/35 80 C 56.25 45 G 43.75 35 ConsensusfromContig7710 40 40 SNP 1 A 1 T 100 80 80 T 100 80 ConsensusfromContig8176 19 10 SNP 1 A 2 C/A 57.5/42.5 46/34 80 C 57.5 46 A 42.5 34 ConsensusfromContig554 323 294 SNP 1 A 2 G/A 64.2/35.8 52/29 81 G 64.19753086 52 A 35.80246914 29 ConsensusfromContig771 177 175 SNP 1 G 2 A/G 51.9/48.1 42/39 81 A 51.85185185 42 G 48.14814815 39 ConsensusfromContig3280 305 271 SNP 1 A 2 C/A 61.7/38.3 50/31 81 C 61.72839506 50 A 38.27160494 31 ConsensusfromContig4152 157 115 SNP 1 T 1 C 90.1 73 81 C 90.12345679 73 ConsensusfromContig5985 70 27 SNP 1 A 2 A/C 61.7/38.3 50/31 81 A 61.72839506 50 C 38.27160494 31 ConsensusfromContig6004 266 251 SNP 1 T 1 C 92.6 75 81 C 92.59259259 75 ConsensusfromContig7670 173 110 SNP 1 G 2 G/T 51.9/48.1 42/39 81 G 51.85185185 42 T 48.14814815 39 ConsensusfromContig8884 125 125 SNP 1 C 2 C/T 60.5/39.5 49/32 81 C 60.49382716 49 T 39.50617284 32 ConsensusfromContig1418 488 478 SNP 1 T 2 G/T 51.2/47.6 42/39 82 G 51.2195122 42 T 47.56097561 39 ConsensusfromContig3189 561 490 SNP 1 A 1 G 95.1 78 82 G 95.12195122 78 ConsensusfromContig3727 56 56 SNP 1 C 2 T/C 63.4/36.6 52/30 82 T 63.41463415 52 C 36.58536585 30 ConsensusfromContig6702 237 207 SNP 1 A 1 T 78 64 82 T 78.04878049 64 ConsensusfromContig3267 399 398 SNP 1 G 1 A 71.1 59 83 A 71.08433735 59 ConsensusfromContig3280 107 79 SNP 1 A 1 T 83.1 69 83 T 83.13253012 69 ConsensusfromContig5943 112 112 SNP 1 C 1 A 81.9 68 83 A 81.92771084 68 ConsensusfromContig6483 43 43 SNP 1 G 1 A 98.8 82 83 A 98.79518072 82 ConsensusfromContig602 186 177 SNP 1 G 1 A 71.4 60 84 A 71.42857143 60 ConsensusfromContig5705 236 33 SNP 1 T 1 C 98.8 83 84 C 98.80952381 83 ConsensusfromContig8811 123 123 SNP 1 T 2 G/T 59.5/40.5 50/34 84 G 59.52380952 50 T 40.47619048 34 ConsensusfromContig3190 721 705 SNP 1 A 1 G 100 85 85 G 100 85 ConsensusfromContig3727 246 246 SNP 1 A 2 A/G 60.0/40.0 51/34 85 A 60 51 G 40 34 ConsensusfromContig5829 132 128 SNP 1 T 2 G/T 64.7/35.3 55/30 85 G 64.70588235 55 T 35.29411765 30 ConsensusfromContig1994 171 171 SNP 1 A 2 A/T 59.3/40.7 51/35 86 A 59.30232558 51 T 40.69767442 35 ConsensusfromContig4756 328 290 SNP 1 G 1 C 43 37 86 C 43.02325581 37 ConsensusfromContig5975 49 41 SNP 1 A 1 G 100 86 86 G 100 86 ConsensusfromContig6016 216 185 SNP 1 C 1 A 67.4 58 86 A 67.44186047 58 ConsensusfromContig6044 15 15 SNP 1 T 1 C 80.2 69 86 C 80.23255814 69 ConsensusfromContig3344 306 298 SNP 1 T 2 C/T 64.4/35.6 56/31 87 C 64.36781609 56 T 35.63218391 31 ConsensusfromContig3366 208 191 SNP 1 A 2 A/C 56.3/43.7 49/38 87 A 56.32183908 49 C 43.67816092 38 ConsensusfromContig5829 234 230 SNP 1 G 2 A/G 56.3/43.7 49/38 87 A 56.32183908 49 G 43.67816092 38 ConsensusfromContig7667 149 149 SNP 1 C 1 T 82.8 72 87 T 82.75862069 72 ConsensusfromContig8717 309 309 SNP 1 C 1 T 100 87 87 T 100 87 ConsensusfromContig460 232 216 SNP 1 A 2 C/A 60.2/39.8 53/35 88 C 60.22727273 53 A 39.77272727 35 ConsensusfromContig7529 496 494 SNP 1 A 2 A/C 52.3/47.7 46/42 88 A 52.27272727 46 C 47.72727273 42 ConsensusfromContig1714 616 612 SNP 1 C 1 T 100 89 89 T 100 89 ConsensusfromContig1755 89 89 SNP 1 G 1 A 100 89 89 A 100 89 ConsensusfromContig7694 101 101 SNP 1 A 1 G 100 89 89 G 100 89 ConsensusfromContig8008 325 325 SNP 1 A 2 A/G 50.6/49.4 45/44 89 A 50.56179775 45 G 49.43820225 44 ConsensusfromContig8655 482 482 SNP 1 C 1 T 100 89 89 T 100 89 ConsensusfromContig8969 432 432 SNP 1 C 1 T 98.9 88 89 T 98.87640449 88 ConsensusfromContig3344 318 310 SNP 1 T 2 T/C 61.1/38.9 55/35 90 T 61.11111111 55 C 38.88888889 35 ConsensusfromContig5636 249 249 SNP 1 A 2 T/A 62.2/37.8 56/34 90 T 62.22222222 56 A 37.77777778 34 ConsensusfromContig244 163 142 SNP 1 A 2 A/T 58.2/41.8 53/38 91 A 58.24175824 53 T 41.75824176 38 ConsensusfromContig3267 381 380 SNP 1 A 1 G 80.2 73 91 G 80.21978022 73 ConsensusfromContig3727 147 147 SNP 1 G 2 G/A 60.4/38.5 55/35 91 G 60.43956044 55 A 38.46153846 35 ConsensusfromContig4332 120 83 SNP 1 A 2 C/A 50.5/49.5 46/45 91 C 50.54945055 46 A 49.45054945 45 ConsensusfromContig4783 509 318 SNP 1 C 1 T 98.9 90 91 T 98.9010989 90 ConsensusfromContig7542 373 335 SNP 1 C 2 A/C 63.7/35.2 58/32 91 A 63.73626374 58 C 35.16483516 32 ConsensusfromContig8213 242 215 SNP 1 G 2 G/C 51.6/47.3 47/43 91 G 51.64835165 47 C 47.25274725 43 ConsensusfromContig4037 358 358 SNP 1 A 2 A/G 56.5/43.5 52/40 92 A 56.52173913 52 G 43.47826087 40 ConsensusfromContig7694 104 104 SNP 1 A 1 C 94.6 87 92 C 94.56521739 87 ConsensusfromContig8993 149 58 SNP 1 A 1 T 81.5 75 92 T 81.52173913 75 ConsensusfromContig7667 232 232 SNP 1 C 2 T/C 50.5/49.5 47/46 93 T 50.53763441 47 C 49.46236559 46 ConsensusfromContig8145 540 521 SNP 1 A 1 G 90.3 84 93 G 90.32258065 84 ConsensusfromContig3189 635 564 SNP 1 A 2 A/G 53.2/46.8 50/44 94 A 53.19148936 50 G 46.80851064 44 ConsensusfromContig3189 654 583 SNP 1 A 2 T/A 63.8/36.2 60/34 94 T 63.82978723 60 A 36.17021277 34 ConsensusfromContig4049 544 359 SNP 1 C 1 T 100 94 94 T 100 94 ConsensusfromContig8877 123 119 SNP 1 A 1 C 100 94 94 C 100 94 ConsensusfromContig31 261 233 SNP 1 A 1 G 98.9 94 95 G 98.94736842 94 ConsensusfromContig462 215 215 SNP 1 G 2 G/T 58.9/41.1 56/39 95 G 58.94736842 56 T 41.05263158 39 ConsensusfromContig740 164 46 SNP 1 C 1 T 98.9 94 95 T 98.94736842 94 ConsensusfromContig2005 516 516 SNP 1 T 2 T/G 62.1/37.9 59/36 95 T 62.10526316 59 G 37.89473684 36 ConsensusfromContig2776 332 304 SNP 1 C 1 T 100 95 95 T 100 95 ConsensusfromContig2798 335 276 SNP 1 G 2 A/G 52.6/47.4 50/45 95 A 52.63157895 50 G 47.36842105 45 ConsensusfromContig5829 296 292 SNP 1 C 1 A 91.6 87 95 A 91.57894737 87 ConsensusfromContig7256 394 354 SNP 1 A 2 A/G 61.1/38.9 58/37 95 A 61.05263158 58 G 38.94736842 37 ConsensusfromContig7385 132 127 SNP 1 T 1 C 67.4 64 95 C 67.36842105 64 ConsensusfromContig8777 130 121 SNP 1 T 2 G/T 64.2/35.8 61/34 95 G 64.21052632 61 T 35.78947368 34 ConsensusfromContig269 32 32 SNP 1 G 1 A 80.2 77 96 A 80.20833333 77 ConsensusfromContig607 203 122 SNP 1 C 1 T 87.5 84 96 T 87.5 84 ConsensusfromContig2152 220 168 SNP 1 C 2 T/C 62.5/37.5 60/36 96 T 62.5 60 C 37.5 36 ConsensusfromContig3281 144 130 SNP 1 A 2 A/C 58.3/40.6 56/39 96 A 58.33333333 56 C 40.625 39 ConsensusfromContig3326 172 154 SNP 1 A 2 C/A 52.1/47.9 50/46 96 C 52.08333333 50 A 47.91666667 46 ConsensusfromContig5253 232 232 SNP 1 C 2 C/T 52.1/47.9 50/46 96 C 52.08333333 50 T 47.91666667 46 ConsensusfromContig672 330 329 SNP 1 A 1 G 75.3 73 97 G 75.25773196 73 ConsensusfromContig1193 130 118 SNP 1 T 1 C 94.8 92 97 C 94.84536082 92 ConsensusfromContig1418 486 476 SNP 1 A 2 T/A 50.5/49.5 49/48 97 T 50.51546392 49 A 49.48453608 48 ConsensusfromContig2293 57 44 SNP 1 T 1 A 100 97 97 A 100 97 ConsensusfromContig3234 335 319 SNP 1 A 1 G 100 97 97 G 100 97 ConsensusfromContig3272 131 120 SNP 1 A 2 G/A 52.6/47.4 51/46 97 G 52.57731959 51 A 47.42268041 46 ConsensusfromContig4573 456 380 SNP 1 C 1 T 100 97 97 T 100 97 ConsensusfromContig5829 129 125 SNP 1 A 2 T/A 58.8/41.2 57/40 97 T 58.7628866 57 A 41.2371134 40 ConsensusfromContig6004 291 276 SNP 1 G 1 A 79.8 79 99 A 79.7979798 79 ConsensusfromContig6626 156 134 SNP 1 T 2 T/C 62.6/37.4 62/37 99 T 62.62626263 62 C 37.37373737 37 ConsensusfromContig771 391 389 SNP 1 T 2 T/C 59.0/41.0 59/41 100 T 59 59 C 41 41 ConsensusfromContig5877 111 109 SNP 1 A 1 G 98 98 100 G 98 98 ConsensusfromContig176 96 69 SNP 1 G 2 G/T 61.4/38.6 62/39 101 G 61.38613861 62 T 38.61386139 39 ConsensusfromContig1193 145 133 SNP 1 T 1 C 95 96 101 C 95.04950495 96 ConsensusfromContig2624 54 24 SNP 1 C 1 T 100 101 101 T 100 101 ConsensusfromContig3219 227 211 SNP 1 C 1 T 85.1 86 101 T 85.14851485 86 ConsensusfromContig3295 152 152 SNP 1 T 2 C/T 61.4/38.6 62/39 101 C 61.38613861 62 T 38.61386139 39 ConsensusfromContig3805 98 98 SNP 1 T 1 C 100 101 101 C 100 101 ConsensusfromContig4791 275 275 SNP 1 C 1 T 100 101 101 T 100 101 ConsensusfromContig5617 137 129 SNP 1 C 2 C/T 60.4/39.6 61/40 101 C 60.3960396 61 T 39.6039604 40 ConsensusfromContig7256 204 164 SNP 1 G 2 A/G 52.5/47.5 53/48 101 A 52.47524752 53 G 47.52475248 48 ConsensusfromContig7580 515 454 SNP 1 C 1 G 84.2 85 101 G 84.15841584 85 ConsensusfromContig1364 163 163 SNP 1 C 1 T 100 102 102 T 100 102 ConsensusfromContig5901 143 143 SNP 1 G 1 T 93.2 96 103 T 93.2038835 96 ConsensusfromContig7972 404 404 SNP 1 A 2 A/C 64.1/35.9 66/37 103 A 64.0776699 66 C 35.9223301 37 ConsensusfromContig9253 45 11 SNP 1 T 1 G 88.3 91 103 G 88.34951456 91 ConsensusfromContig454 64 45 SNP 1 C 1 T 100 104 104 T 100 104 ConsensusfromContig6498 209 202 SNP 1 G 1 A 68.3 71 104 A 68.26923077 71 ConsensusfromContig1364 460 425 SNP 1 T 1 C 100 105 105 C 100 105 ConsensusfromContig1735 218 212 SNP 1 T 2 T/C 64.8/35.2 68/37 105 T 64.76190476 68 C 35.23809524 37 ConsensusfromContig8145 618 599 SNP 1 C 1 A 99 104 105 A 99.04761905 104 ConsensusfromContig4279 137 116 SNP 1 C 1 T 100 106 106 T 100 106 ConsensusfromContig6004 246 231 SNP 1 T 2 T/C 61.3/38.7 65/41 106 T 61.32075472 65 C 38.67924528 41 ConsensusfromContig6611 98 64 SNP 1 C 1 T 100 106 106 T 100 106 ConsensusfromContig7810 338 326 SNP 1 G 1 A 89.6 95 106 A 89.62264151 95 ConsensusfromContig3578 156 145 SNP 1 T 2 C/T 56.1/43.9 60/47 107 C 56.07476636 60 T 43.92523364 47 ConsensusfromContig7810 290 278 SNP 1 A 1 G 76.6 82 107 G 76.63551402 82 ConsensusfromContig607 205 124 SNP 1 T 1 C 98.1 106 108 C 98.14814815 106 ConsensusfromContig3199 236 228 SNP 1 C 1 T 67.6 73 108 T 67.59259259 73 ConsensusfromContig3203 13 5 SNP 1 T 1 C 99.1 107 108 C 99.07407407 107 ConsensusfromContig646 342 318 SNP 1 G 2 A/G 56.9/43.1 62/47 109 A 56.88073394 62 G 43.11926606 47 ConsensusfromContig3177 427 288 SNP 1 C 2 C/T 59.1/40.9 65/45 110 C 59.09090909 65 T 40.90909091 45 ConsensusfromContig3581 254 254 SNP 1 A 1 T 92.7 102 110 T 92.72727273 102 ConsensusfromContig6539 413 382 SNP 1 G 2 G/A 60.0/40.0 66/44 110 G 60 66 A 40 44 ConsensusfromContig604 346 315 SNP 1 G 2 G/A 55.0/45.0 61/50 111 G 54.95495495 61 A 45.04504505 50 ConsensusfromContig722 46 46 SNP 1 A 1 G 99.1 110 111 G 99.0990991 110 ConsensusfromContig995 144 96 SNP 1 A 1 G 100 111 111 G 100 111 ConsensusfromContig2152 205 153 SNP 1 T 2 C/T 63.1/36.9 70/41 111 C 63.06306306 70 T 36.93693694 41 ConsensusfromContig4839 786 716 SNP 1 A 1 G 100 111 111 G 100 111 ConsensusfromContig8903 98 98 SNP 1 G 2 T/G 55.0/45.0 61/50 111 T 54.95495495 61 G 45.04504505 50 ConsensusfromContig3344 219 211 SNP 1 A 2 T/A 56.2/43.8 63/49 112 T 56.25 63 A 43.75 49 ConsensusfromContig4573 304 233 SNP 1 C 1 T 71.7 81 113 T 71.68141593 81 ConsensusfromContig5901 346 346 SNP 1 A 1 T 78.9 90 114 T 78.94736842 90 ConsensusfromContig261 333 333 SNP 1 G 2 T/G 60.0/40.0 69/46 115 T 60 69 G 40 46 ConsensusfromContig3623 172 172 SNP 1 C 1 G 71.3 82 115 G 71.30434783 82 ConsensusfromContig4279 121 100 SNP 1 C 1 T 100 115 115 T 100 115 ConsensusfromContig6498 68 61 SNP 1 A 2 A/C 53.9/46.1 62/53 115 A 53.91304348 62 C 46.08695652 53 ConsensusfromContig8624 129 123 SNP 1 A 2 C/A 51.3/48.7 59/56 115 C 51.30434783 59 A 48.69565217 56 ConsensusfromContig995 273 225 SNP 1 A 1 T 99.1 115 116 T 99.13793103 115 ConsensusfromContig1388 329 270 SNP 1 G 1 T 99.1 115 116 T 99.13793103 115 ConsensusfromContig2597 370 178 SNP 1 G 1 A 99.1 115 116 A 99.13793103 115 ConsensusfromContig2778 107 48 SNP 1 A 1 T 100 116 116 T 100 116 ConsensusfromContig6382 59 53 SNP 1 A 1 G 81.9 95 116 G 81.89655172 95 ConsensusfromContig5829 228 224 SNP 1 C 2 C/T 52.1/47.0 61/55 117 C 52.13675214 61 T 47.00854701 55 ConsensusfromContig5901 312 312 SNP 1 C 1 T 98.3 115 117 T 98.29059829 115 ConsensusfromContig7179 159 132 SNP 1 C 2 A/C 52.1/47.9 61/56 117 A 52.13675214 61 C 47.86324786 56 ConsensusfromContig8865 52 52 SNP 1 C 1 T 76.1 89 117 T 76.06837607 89 ConsensusfromContig462 212 212 SNP 1 C 2 C/T 50.8/49.2 60/58 118 C 50.84745763 60 T 49.15254237 58 ConsensusfromContig3433 93 93 SNP 1 T 2 T/C 64.4/35.6 76/42 118 T 64.40677966 76 C 35.59322034 42 ConsensusfromContig7048 147 141 SNP 1 T 1 C 68.6 81 118 C 68.6440678 81 ConsensusfromContig8761 165 158 SNP 1 C 2 T/C 58.5/41.5 69/49 118 T 58.47457627 69 C 41.52542373 49 ConsensusfromContig732 40 24 SNP 1 G 1 A 100 119 119 A 100 119 ConsensusfromContig2177 91 89 SNP 1 C 2 C/T 62.2/37.8 74/45 119 C 62.18487395 74 T 37.81512605 45 ConsensusfromContig2414 142 100 SNP 1 T 1 C 79 94 119 C 78.99159664 94 ConsensusfromContig3267 297 296 SNP 1 A 2 A/G 59.7/40.3 71/48 119 A 59.66386555 71 G 40.33613445 48 ConsensusfromContig3727 278 278 SNP 1 A 1 G 100 119 119 G 100 119 ConsensusfromContig7248 234 217 SNP 1 A 2 A/G 62.5/37.5 75/45 120 A 62.5 75 G 37.5 45 ConsensusfromContig8075 753 585 SNP 1 C 2 A/C 60.8/39.2 73/47 120 A 60.83333333 73 C 39.16666667 47 ConsensusfromContig3219 53 37 SNP 1 C 2 C/T 62.0/38.0 75/46 121 C 61.98347107 75 T 38.01652893 46 ConsensusfromContig4782 615 583 SNP 1 C 1 A 84.3 102 121 A 84.29752066 102 ConsensusfromContig5362 495 488 SNP 1 T 2 C/T 62.8/36.4 76/44 121 C 62.80991736 76 T 36.36363636 44 ConsensusfromContig5849 186 160 SNP 1 G 1 A 100 121 121 A 100 121 ConsensusfromContig6389 64 53 SNP 1 G 1 A 100 121 121 A 100 121 ConsensusfromContig8624 131 125 SNP 1 C 2 C/T 50.4/49.6 61/60 121 C 50.41322314 61 T 49.58677686 60 ConsensusfromContig8865 58 58 SNP 1 C 2 C/T 62.8/37.2 76/45 121 C 62.80991736 76 T 37.19008264 45 ConsensusfromContig1428 195 191 SNP 1 A 2 G/A 54.9/45.1 67/55 122 G 54.91803279 67 A 45.08196721 55 ConsensusfromContig1534 342 329 SNP 1 A 2 A/G 62.3/37.7 76/46 122 A 62.29508197 76 G 37.70491803 46 ConsensusfromContig7548 368 343 SNP 1 A 2 A/C 59.8/40.2 73/49 122 A 59.83606557 73 C 40.16393443 49 ConsensusfromContig7667 221 221 SNP 1 A 2 G/A 64.8/35.2 79/43 122 G 64.75409836 79 A 35.24590164 43 ConsensusfromContig7667 227 227 SNP 1 A 2 T/A 59.0/41.0 72/50 122 T 59.01639344 72 A 40.98360656 50 ConsensusfromContig7810 50 38 SNP 1 T 2 G/T 62.3/37.7 76/46 122 G 62.29508197 76 T 37.70491803 46 ConsensusfromContig434 181 169 SNP 1 G 1 A 99.2 122 123 A 99.18699187 122 ConsensusfromContig7113 400 259 SNP 1 C 1 T 100 123 123 T 100 123 ConsensusfromContig7411 61 58 SNP 1 C 1 T 100 123 123 T 100 123 ConsensusfromContig8703 348 335 SNP 1 T 1 C 90.2 111 123 C 90.24390244 111 ConsensusfromContig1534 344 331 SNP 1 A 2 A/G 58.1/41.9 72/52 124 A 58.06451613 72 G 41.93548387 52 ConsensusfromContig3623 28 28 SNP 1 A 2 G/A 60.5/39.5 75/49 124 G 60.48387097 75 A 39.51612903 49 ConsensusfromContig3794 199 174 SNP 1 T 1 G 79 98 124 G 79.03225806 98 ConsensusfromContig6070 154 154 SNP 1 A 1 G 65.3 81 124 G 65.32258065 81 ConsensusfromContig5554 319 310 SNP 1 N 1 A 100 126 126 A 100 126 ConsensusfromContig8597 288 285 SNP 1 A 1 G 74.6 94 126 G 74.6031746 94 ConsensusfromContig29 190 65 SNP 1 A 1 C 100 127 127 C 100 127 ConsensusfromContig7937 309 294 SNP 1 A 1 G 65.4 83 127 G 65.35433071 83 ConsensusfromContig2658 113 101 SNP 1 A 2 A/C 59.7/40.3 77/52 129 A 59.68992248 77 C 40.31007752 52 ConsensusfromContig8008 274 274 SNP 1 T 2 A/T 53.5/45.7 69/59 129 A 53.48837209 69 T 45.73643411 59 ConsensusfromContig3189 572 501 SNP 1 T 1 C 93.1 121 130 C 93.07692308 121 ConsensusfromContig832 168 137 SNP 1 G 1 A 99.2 130 131 A 99.23664122 130 ConsensusfromContig3229 361 346 SNP 1 T 2 C/T 51.9/48.1 68/63 131 C 51.90839695 68 T 48.09160305 63 ConsensusfromContig3280 216 188 SNP 1 C 2 T/C 50.4/49.6 66/65 131 T 50.38167939 66 C 49.61832061 65 ConsensusfromContig261 45 45 SNP 1 C 1 T 100 132 132 T 100 132 ConsensusfromContig1901 107 90 SNP 1 A 1 G 81.8 108 132 G 81.81818182 108 ConsensusfromContig2177 97 95 SNP 1 C 2 C/T 50.8/49.2 67/65 132 C 50.75757576 67 T 49.24242424 65 ConsensusfromContig6667 72 57 SNP 1 T 1 C 97 128 132 C 96.96969697 128 ConsensusfromContig275 177 154 SNP 1 A 2 A/C 51.9/46.6 69/62 133 A 51.87969925 69 C 46.61654135 62 ConsensusfromContig7045 10 10 SNP 1 C 1 T 100 133 133 T 100 133 ConsensusfromContig1348 398 357 SNP 1 T 2 T/G 61.9/38.1 83/51 134 T 61.94029851 83 G 38.05970149 51 ConsensusfromContig1901 57 40 SNP 1 N 1 T 100 134 134 T 100 134 ConsensusfromContig3727 153 153 SNP 1 A 2 A/G 57.5/41.0 77/55 134 A 57.46268657 77 G 41.04477612 55 ConsensusfromContig7529 541 539 SNP 1 A 1 G 98.5 132 134 G 98.50746269 132 ConsensusfromContig8877 104 100 SNP 1 A 2 A/G 62.7/37.3 84/50 134 A 62.68656716 84 G 37.31343284 50 ConsensusfromContig5738 116 116 SNP 1 G 2 A/G 51.9/48.1 70/65 135 A 51.85185185 70 G 48.14814815 65 ConsensusfromContig8475 324 285 SNP 1 C 2 T/C 57.0/43.0 77/58 135 T 57.03703704 77 C 42.96296296 58 ConsensusfromContig8482 307 250 SNP 1 T 1 C 79.3 107 135 C 79.25925926 107 ConsensusfromContig1428 204 200 SNP 1 C 2 T/C 51.5/48.5 70/66 136 T 51.47058824 70 C 48.52941176 66 ConsensusfromContig3036 151 121 SNP 1 G 2 A/G 52.9/47.1 72/64 136 A 52.94117647 72 G 47.05882353 64 ConsensusfromContig8585 350 308 SNP 1 A 2 C/A 57.4/42.6 78/58 136 C 57.35294118 78 A 42.64705882 58 ConsensusfromContig8587 161 155 SNP 1 A 2 A/G 55.1/44.9 75/61 136 A 55.14705882 75 G 44.85294118 61 ConsensusfromContig2024 601 601 SNP 1 A 1 G 100 137 137 G 100 137 ConsensusfromContig2475 422 403 SNP 1 C 2 T/C 57.7/42.3 79/58 137 T 57.66423358 79 C 42.33576642 58 ConsensusfromContig8703 87 74 SNP 1 G 1 A 100 137 137 A 100 137 ConsensusfromContig9044 197 161 SNP 1 A 1 G 100 137 137 G 100 137 ConsensusfromContig4898 72 72 SNP 1 G 2 A/G 52.9/47.1 73/65 138 A 52.89855072 73 G 47.10144928 65 ConsensusfromContig7411 146 143 SNP 1 G 1 T 75.4 104 138 T 75.36231884 104 ConsensusfromContig7529 538 536 SNP 1 T 1 C 66.7 92 138 C 66.66666667 92 ConsensusfromContig292 650 638 SNP 1 C 1 T 100 139 139 T 100 139 ConsensusfromContig3203 19 11 SNP 1 A 1 G 85.6 119 139 G 85.61151079 119 ConsensusfromContig6389 136 123 SNP 1 C 1 A 100 139 139 A 100 139 ConsensusfromContig7667 106 106 SNP 1 A 1 G 100 139 139 G 100 139 ConsensusfromContig8208 348 328 SNP 1 C 2 T/C 63.3/36.7 88/51 139 T 63.30935252 88 C 36.69064748 51 ConsensusfromContig1014 51 49 SNP 1 G 2 G/T 63.1/36.2 89/51 141 G 63.12056738 89 T 36.17021277 51 ConsensusfromContig3190 527 511 SNP 1 C 1 T 100 141 141 T 100 141 ConsensusfromContig7411 128 125 SNP 1 G 1 A 65.2 92 141 A 65.24822695 92 ConsensusfromContig2776 357 329 SNP 1 C 2 C/T 61.5/38.5 88/55 143 C 61.53846154 88 T 38.46153846 55 ConsensusfromContig4125 291 261 SNP 1 C 2 T/C 54.5/45.5 78/65 143 T 54.54545455 78 C 45.45454545 65 ConsensusfromContig6037 153 137 SNP 1 G 1 A 99.3 142 143 A 99.3006993 142 ConsensusfromContig8008 265 265 SNP 1 A 2 G/A 56.6/43.4 81/62 143 G 56.64335664 81 A 43.35664336 62 ConsensusfromContig8825 66 66 SNP 1 A 1 G 95.8 137 143 G 95.8041958 137 ConsensusfromContig3272 332 321 SNP 1 A 2 A/G 50.7/49.3 73/71 144 A 50.69444444 73 G 49.30555556 71 ConsensusfromContig7548 213 188 SNP 1 C 1 T 98.6 142 144 T 98.61111111 142 ConsensusfromContig8877 56 52 SNP 1 C 2 C/A 62.8/37.2 91/54 145 C 62.75862069 91 A 37.24137931 54 ConsensusfromContig9005 431 395 SNP 1 C 2 C/A 64.1/35.9 93/52 145 C 64.13793103 93 A 35.86206897 52 ConsensusfromContig7667 140 140 SNP 1 C 1 T 65.1 95 146 T 65.06849315 95 ConsensusfromContig2239 280 280 SNP 1 A 2 A/C 60.5/39.5 89/58 147 A 60.54421769 89 C 39.45578231 58 ConsensusfromContig7265 168 168 SNP 1 T 1 G 80.3 118 147 G 80.27210884 118 ConsensusfromContig1428 239 235 SNP 1 T 2 T/A 56.8/43.2 84/64 148 T 56.75675676 84 A 43.24324324 64 ConsensusfromContig3295 161 161 SNP 1 G 1 A 66.2 98 148 A 66.21621622 98 ConsensusfromContig3840 403 370 SNP 1 A 1 G 100 148 148 G 100 148 ConsensusfromContig5936 8 4 SNP 1 C 1 G 100 148 148 G 100 148 ConsensusfromContig7265 165 165 SNP 1 C 1 T 97.3 144 148 T 97.2972973 144 ConsensusfromContig3236 190 190 SNP 1 C 1 T 80.5 120 149 T 80.53691275 120 ConsensusfromContig3267 309 308 SNP 1 G 2 G/A 62.4/37.6 93/56 149 G 62.41610738 93 A 37.58389262 56 ConsensusfromContig3280 65 37 SNP 1 A 1 C 66.4 99 149 C 66.44295302 99 ConsensusfromContig6312 125 125 SNP 1 C 2 T/C 61.3/38.7 92/58 150 T 61.33333333 92 C 38.66666667 58 ConsensusfromContig8458 432 240 SNP 1 T 1 C 89.3 134 150 C 89.33333333 134 ConsensusfromContig1994 328 328 SNP 1 C 1 T 100 151 151 T 100 151 ConsensusfromContig2024 89 89 SNP 1 C 1 T 100 151 151 T 100 151 ConsensusfromContig2210 159 159 SNP 1 T 2 T/A 58.3/41.7 88/63 151 T 58.2781457 88 A 41.7218543 63 ConsensusfromContig3377 280 231 SNP 1 A 2 G/A 59.6/40.4 90/61 151 G 59.60264901 90 A 40.39735099 61 ConsensusfromContig3741 164 133 SNP 1 G 2 A/G 51.0/49.0 77/74 151 A 50.99337748 77 G 49.00662252 74 ConsensusfromContig7548 197 172 SNP 1 A 1 G 92.1 139 151 G 92.05298013 139 ConsensusfromContig3727 13 13 SNP 1 A 2 A/T 60.5/39.5 92/60 152 A 60.52631579 92 T 39.47368421 60 ConsensusfromContig3299 94 94 SNP 1 A 2 G/A 52.9/45.1 81/69 153 G 52.94117647 81 A 45.09803922 69 ConsensusfromContig160 107 100 SNP 1 T 2 T/C 58.4/41.6 90/64 154 T 58.44155844 90 C 41.55844156 64 ConsensusfromContig607 227 146 SNP 1 C 1 T 96.8 149 154 T 96.75324675 149 ConsensusfromContig1994 161 161 SNP 1 T 2 T/G 52.6/47.4 81/73 154 T 52.5974026 81 G 47.4025974 73 ConsensusfromContig2024 595 595 SNP 1 C 1 T 100 154 154 T 100 154 ConsensusfromContig7529 267 265 SNP 1 A 1 C 100 154 154 C 100 154 ConsensusfromContig8208 356 336 SNP 1 G 2 A/G 60.4/39.6 93/61 154 A 60.38961039 93 G 39.61038961 61 ConsensusfromContig8777 143 134 SNP 1 A 1 G 79.2 122 154 G 79.22077922 122 ConsensusfromContig147 54 54 SNP 1 A 1 G 94.8 147 155 G 94.83870968 147 ConsensusfromContig1065 592 548 SNP 1 N 1 A 100 155 155 A 100 155 ConsensusfromContig3199 258 250 SNP 1 C 2 C/A 63.9/36.1 99/56 155 C 63.87096774 99 A 36.12903226 56 ConsensusfromContig6502 483 467 SNP 1 A 2 A/G 54.2/45.8 84/71 155 A 54.19354839 84 G 45.80645161 71 ConsensusfromContig8159 217 211 SNP 1 C 2 C/A 63.9/36.1 99/56 155 C 63.87096774 99 A 36.12903226 56 ConsensusfromContig5829 174 170 SNP 1 A 2 A/G 57.7/42.3 90/66 156 A 57.69230769 90 G 42.30769231 66 ConsensusfromContig7210 172 172 SNP 1 A 2 A/G 50.0/50.0 78/78 156 A 50 78 G 50 78 ConsensusfromContig7937 512 497 SNP 1 C 1 G 100 158 158 G 100 158 ConsensusfromContig1650 678 578 SNP 1 G 1 C 69.2 110 159 C 69.18238994 110 ConsensusfromContig7113 412 271 SNP 1 T 1 C 99.4 159 160 C 99.375 159 ConsensusfromContig8139 348 337 SNP 1 A 2 A/G 56.9/43.1 91/69 160 A 56.875 91 G 43.125 69 ConsensusfromContig3490 108 100 SNP 1 C 2 T/C 50.9/49.1 82/79 161 T 50.93167702 82 C 49.06832298 79 ConsensusfromContig5998 11 7 SNP 1 A 1 T 100 161 161 T 100 161 ConsensusfromContig6304 191 164 SNP 1 C 2 C/T 53.4/46.6 86/75 161 C 53.41614907 86 T 46.58385093 75 ConsensusfromContig4152 361 319 SNP 1 T 1 C 89.5 145 162 C 89.50617284 145 ConsensusfromContig6570 118 118 SNP 1 T 2 T/C 56.8/43.2 92/70 162 T 56.79012346 92 C 43.20987654 70 ConsensusfromContig8159 226 220 SNP 1 G 2 G/A 58.6/41.4 95/67 162 G 58.64197531 95 A 41.35802469 67 ConsensusfromContig3344 294 286 SNP 1 C 2 C/T 52.1/47.9 85/78 163 C 52.14723926 85 T 47.85276074 78 ConsensusfromContig8703 338 325 SNP 1 G 1 A 91.4 149 163 A 91.41104294 149 ConsensusfromContig3578 470 457 SNP 1 A 1 C 76.2 125 164 C 76.2195122 125 ConsensusfromContig4114 218 201 SNP 1 G 1 T 94.5 155 164 T 94.51219512 155 ConsensusfromContig6070 128 128 SNP 1 C 1 T 75.6 124 164 T 75.6097561 124 ConsensusfromContig3581 255 255 SNP 1 A 2 A/T 60.6/39.4 100/65 165 A 60.60606061 100 T 39.39393939 65 ConsensusfromContig275 176 153 SNP 1 G 2 G/A 62.7/37.3 104/62 166 G 62.65060241 104 A 37.34939759 62 ConsensusfromContig8580 119 115 SNP 1 A 2 A/C 64.5/35.5 107/59 166 A 64.45783133 107 C 35.54216867 59 ConsensusfromContig6502 73 57 SNP 1 T 2 T/G 55.1/44.9 92/75 167 T 55.08982036 92 G 44.91017964 75 ConsensusfromContig554 246 218 SNP 1 A 1 G 66.7 112 168 G 66.66666667 112 ConsensusfromContig7548 35 10 SNP 1 T 2 T/G 61.5/37.9 104/64 169 T 61.53846154 104 G 37.86982249 64 ConsensusfromContig6312 26 26 SNP 1 C 2 C/T 58.8/41.2 100/70 170 C 58.82352941 100 T 41.17647059 70 ConsensusfromContig7505 182 154 SNP 1 A 1 G 68.4 117 171 G 68.42105263 117 ConsensusfromContig3329 289 289 SNP 1 A 2 T/A 57.0/41.9 98/72 172 T 56.97674419 98 A 41.86046512 72 ConsensusfromContig5998 98 94 SNP 1 C 2 C/T 62.4/37.6 108/65 173 C 62.42774566 108 T 37.57225434 65 ConsensusfromContig6312 80 80 SNP 1 T 2 T/C 54.6/45.4 95/79 174 T 54.59770115 95 C 45.40229885 79 ConsensusfromContig3280 373 339 SNP 1 T 1 C 59.4 104 175 C 59.42857143 104 ConsensusfromContig6570 150 150 SNP 1 G 1 C 76 133 175 C 76 133 ConsensusfromContig4152 244 202 SNP 1 A 2 G/A 52.5/47.5 93/84 177 G 52.54237288 93 A 47.45762712 84 ConsensusfromContig5237 262 251 SNP 1 T 2 T/C 59.3/40.7 105/72 177 T 59.3220339 105 C 40.6779661 72 ConsensusfromContig5975 21 13 SNP 1 A 2 A/G 51.4/48.6 91/86 177 A 51.41242938 91 G 48.58757062 86 ConsensusfromContig7529 430 428 SNP 1 C 1 A 73.4 130 177 A 73.44632768 130 ConsensusfromContig3727 27 27 SNP 1 T 2 T/C 64.0/36.0 114/64 178 T 64.04494382 114 C 35.95505618 64 ConsensusfromContig5829 177 173 SNP 1 G 2 G/T 61.2/38.8 109/69 178 G 61.23595506 109 T 38.76404494 69 ConsensusfromContig8475 240 201 SNP 1 T 2 T/C 57.9/42.1 103/75 178 T 57.86516854 103 C 42.13483146 75 ConsensusfromContig3344 276 268 SNP 1 C 2 T/C 52.5/47.5 95/86 181 T 52.48618785 95 C 47.51381215 86 ConsensusfromContig3433 87 87 SNP 1 T 2 C/T 51.9/48.1 94/87 181 C 51.93370166 94 T 48.06629834 87 ConsensusfromContig4152 124 82 SNP 1 G 2 G/A 63.5/35.9 115/65 181 G 63.5359116 115 A 35.91160221 65 ConsensusfromContig6044 78 78 SNP 1 A 2 G/A 55.8/44.2 101/80 181 G 55.80110497 101 A 44.19889503 80 ConsensusfromContig3219 149 133 SNP 1 C 2 C/A 53.8/46.2 98/84 182 C 53.84615385 98 A 46.15384615 84 ConsensusfromContig7480 119 119 SNP 1 C 2 C/A 57.7/42.3 105/77 182 C 57.69230769 105 A 42.30769231 77 ConsensusfromContig6539 310 279 SNP 1 A 2 C/A 61.4/38.6 113/71 184 C 61.41304348 113 A 38.58695652 71 ConsensusfromContig5705 239 36 SNP 1 C 2 C/T 60.0/40.0 111/74 185 C 60 111 T 40 74 ConsensusfromContig1994 205 205 SNP 1 G 1 A 99.5 186 187 A 99.46524064 186 ConsensusfromContig8559 148 148 SNP 1 G 2 T/G 59.0/41.0 111/77 188 T 59.04255319 111 G 40.95744681 77 ConsensusfromContig426 233 190 SNP 1 C 1 T 68.8 130 189 T 68.78306878 130 ConsensusfromContig2148 581 279 SNP 1 A 1 T 88.5 169 191 T 88.48167539 169 ConsensusfromContig1954 242 190 SNP 1 C 1 T 99 190 192 T 98.95833333 190 ConsensusfromContig7472 345 289 SNP 1 A 1 G 100 192 192 G 100 192 ConsensusfromContig1647 208 207 SNP 1 G 2 G/A 64.2/35.8 124/69 193 G 64.24870466 124 A 35.75129534 69 ConsensusfromContig3214 381 381 SNP 1 A 2 A/T 62.2/36.3 120/70 193 A 62.1761658 120 T 36.26943005 70 ConsensusfromContig8409 146 111 SNP 1 A 2 G/A 53.1/46.9 103/91 194 G 53.09278351 103 A 46.90721649 91 ConsensusfromContig2776 226 198 SNP 1 C 1 T 74.4 145 195 T 74.35897436 145 ConsensusfromContig412 130 120 SNP 1 C 1 T 100 196 196 T 100 196 ConsensusfromContig2275 62 62 SNP 1 C 1 T 89.3 175 196 T 89.28571429 175 ConsensusfromContig8447 154 135 SNP 1 G 1 T 71.4 140 196 T 71.42857143 140 ConsensusfromContig1348 319 278 SNP 1 C 1 T 67.2 133 198 T 67.17171717 133 ConsensusfromContig6481 239 239 SNP 1 G 1 A 99.5 197 198 A 99.49494949 197 ConsensusfromContig7456 172 172 SNP 1 C 1 T 100 198 198 T 100 198 ConsensusfromContig3490 115 107 SNP 1 A 2 C/A 59.0/41.0 118/82 200 C 59 118 A 41 82 ConsensusfromContig3229 346 331 SNP 1 T 2 C/T 56.9/43.1 115/87 202 C 56.93069307 115 T 43.06930693 87 ConsensusfromContig8171 146 144 SNP 1 C 1 A 89.6 181 202 A 89.6039604 181 ConsensusfromContig230 146 146 SNP 1 T 2 C/T 55.7/44.3 113/90 203 C 55.66502463 113 T 44.33497537 90 ConsensusfromContig713 85 77 SNP 1 A 1 G 100 203 203 G 100 203 ConsensusfromContig1637 349 349 SNP 1 C 1 T 75.9 154 203 T 75.86206897 154 ConsensusfromContig7548 86 61 SNP 1 T 2 T/G 59.6/40.4 121/82 203 T 59.60591133 121 G 40.39408867 82 ConsensusfromContig1065 478 434 SNP 1 G 1 A 100 204 204 A 100 204 ConsensusfromContig6481 241 241 SNP 1 G 1 A 99.5 204 205 A 99.51219512 204 ConsensusfromContig7456 167 167 SNP 1 C 1 G 100 205 205 G 100 205 ConsensusfromContig3219 152 136 SNP 1 T 2 T/C 51.0/41.3 105/85 206 T 50.97087379 105 C 41.26213592 85 ConsensusfromContig4162 217 164 SNP 1 C 1 G 100 206 206 G 100 206 ConsensusfromContig4019 98 98 SNP 1 A 1 G 85.5 177 207 G 85.50724638 177 ConsensusfromContig6626 78 56 SNP 1 T 1 G 78.9 165 209 G 78.94736842 165 ConsensusfromContig3451 258 114 SNP 1 A 1 C 80.6 170 211 C 80.56872038 170 ConsensusfromContig1637 203 203 SNP 1 A 2 C/A 58.5/41.5 124/88 212 C 58.49056604 124 A 41.50943396 88 ConsensusfromContig6176 139 136 SNP 1 A 1 G 100 212 212 G 100 212 ConsensusfromContig1594 126 126 SNP 1 T 2 G/T 63.8/35.7 136/76 213 G 63.84976526 136 T 35.68075117 76 ConsensusfromContig2118 117 117 SNP 1 T 1 C 74.3 159 214 C 74.29906542 159 ConsensusfromContig4152 187 145 SNP 1 T 2 T/C 52.3/47.7 112/102 214 T 52.3364486 112 C 47.6635514 102 ConsensusfromContig5237 304 293 SNP 1 G 2 T/G 53.2/46.3 115/100 216 T 53.24074074 115 G 46.2962963 100 ConsensusfromContig2619 67 59 SNP 1 A 1 G 99.1 215 217 G 99.07834101 215 ConsensusfromContig8171 302 300 SNP 1 C 1 G 87.6 190 217 G 87.55760369 190 ConsensusfromContig8475 456 417 SNP 1 C 2 C/T 52.5/47.5 114/103 217 C 52.53456221 114 T 47.46543779 103 ConsensusfromContig7505 217 189 SNP 1 G 1 A 65.1 142 218 A 65.13761468 142 ConsensusfromContig8152 461 405 SNP 1 G 2 A/G 64.2/35.8 140/78 218 A 64.22018349 140 G 35.77981651 78 ConsensusfromContig3177 497 358 SNP 1 A 2 A/G 63.2/36.8 139/81 220 A 63.18181818 139 G 36.81818182 81 ConsensusfromContig5253 131 131 SNP 1 C 2 T/C 62.3/37.3 137/82 220 T 62.27272727 137 C 37.27272727 82 ConsensusfromContig2252 164 136 SNP 1 C 1 T 83.3 185 222 T 83.33333333 185 ConsensusfromContig4573 532 456 SNP 1 G 1 A 100 224 224 A 100 224 ConsensusfromContig3203 288 280 SNP 1 A 2 A/C 56.0/44.0 126/99 225 A 56 126 C 44 99 ConsensusfromContig3270 138 52 SNP 1 A 1 G 65.8 148 225 G 65.77777778 148 ConsensusfromContig6060 55 55 SNP 1 C 2 T/C 59.1/40.9 133/92 225 T 59.11111111 133 C 40.88888889 92 ConsensusfromContig1193 449 437 SNP 1 C 2 C/A 60.6/39.4 137/89 226 C 60.61946903 137 A 39.38053097 89 ConsensusfromContig3214 456 456 SNP 1 A 2 C/A 59.7/40.3 135/91 226 C 59.73451327 135 A 40.26548673 91 ConsensusfromContig8152 449 393 SNP 1 C 2 T/C 52.2/47.8 119/109 228 T 52.19298246 119 C 47.80701754 109 ConsensusfromContig8724 262 261 SNP 1 A 1 G 78.1 178 228 G 78.07017544 178 ConsensusfromContig230 161 161 SNP 1 C 2 C/T 58.7/41.3 135/95 230 C 58.69565217 135 T 41.30434783 95 ConsensusfromContig9005 293 257 SNP 1 C 1 T 99.6 229 230 T 99.56521739 229 ConsensusfromContig2196 34 34 SNP 1 T 1 C 93.5 216 231 C 93.50649351 216 ConsensusfromContig5734 354 346 SNP 1 A 2 G/A 50.4/49.6 117/115 232 G 50.43103448 117 A 49.56896552 115 ConsensusfromContig7210 150 150 SNP 1 A 1 G 98.3 229 233 G 98.2832618 229 ConsensusfromContig8877 59 55 SNP 1 A 2 A/G 59.8/40.2 140/94 234 A 59.82905983 140 G 40.17094017 94 ConsensusfromContig1637 205 205 SNP 1 C 2 G/C 50.6/49.4 119/116 235 G 50.63829787 119 C 49.36170213 116 ConsensusfromContig1594 127 127 SNP 1 T 2 G/T 60.6/39.0 143/92 236 G 60.59322034 143 T 38.98305085 92 ConsensusfromContig7132 399 145 SNP 1 A 1 G 68.6 162 236 G 68.6440678 162 ConsensusfromContig4114 454 431 SNP 1 C 2 C/A 59.5/40.5 141/96 237 C 59.49367089 141 A 40.50632911 96 ConsensusfromContig7209 291 274 SNP 1 G 2 T/G 50.6/49.4 120/117 237 T 50.63291139 120 G 49.36708861 117 ConsensusfromContig3727 42 42 SNP 1 G 2 G/A 56.7/43.3 135/103 238 G 56.72268908 135 A 43.27731092 103 ConsensusfromContig7542 199 161 SNP 1 T 1 C 66.5 159 239 C 66.52719665 159 ConsensusfromContig1637 43 43 SNP 1 T 2 A/T 52.7/46.5 127/112 241 A 52.69709544 127 T 46.47302905 112 ConsensusfromContig4024 262 232 SNP 1 A 2 A/C 55.0/45.0 133/109 242 A 54.95867769 133 C 45.04132231 109 ConsensusfromContig8139 327 316 SNP 1 C 2 T/C 54.3/45.7 132/111 243 T 54.32098765 132 C 45.67901235 111 ConsensusfromContig7548 89 64 SNP 1 C 2 C/A 62.7/36.9 153/90 244 C 62.70491803 153 A 36.8852459 90 ConsensusfromContig7261 209 196 SNP 1 T 2 T/C 53.1/46.9 130/115 245 T 53.06122449 130 C 46.93877551 115 ConsensusfromContig5253 143 143 SNP 1 A 2 G/A 54.5/45.5 134/112 246 G 54.47154472 134 A 45.52845528 112 ConsensusfromContig5774 83 83 SNP 1 A 2 A/G 58.5/41.5 144/102 246 A 58.53658537 144 G 41.46341463 102 ConsensusfromContig6343 47 47 SNP 1 A 2 A/T 51.0/49.0 126/121 247 A 51.01214575 126 T 48.98785425 121 ConsensusfromContig6539 298 267 SNP 1 G 2 G/T 64.0/36.0 158/89 247 G 63.96761134 158 T 36.03238866 89 ConsensusfromContig8597 72 69 SNP 1 A 2 G/A 52.6/47.4 130/117 247 G 52.63157895 130 A 47.36842105 117 ConsensusfromContig2783 234 234 SNP 1 T 2 C/T 58.5/41.5 145/103 248 C 58.46774194 145 T 41.53225806 103 ConsensusfromContig9109 329 319 SNP 1 G 1 T 76.6 190 248 T 76.61290323 190 ConsensusfromContig460 171 155 SNP 1 T 2 T/C 56.4/43.6 141/109 250 T 56.4 141 C 43.6 109 ConsensusfromContig1594 102 102 SNP 1 A 1 G 65.2 163 250 G 65.2 163 ConsensusfromContig3270 477 391 SNP 1 T 2 T/G 54.4/45.6 136/114 250 T 54.4 136 G 45.6 114 ConsensusfromContig6498 302 295 SNP 1 G 1 C 67.5 172 255 C 67.45098039 172 ConsensusfromContig2987 202 202 SNP 1 G 2 G/A 56.2/42.2 144/108 256 G 56.25 144 A 42.1875 108 ConsensusfromContig3203 329 321 SNP 1 A 2 T/A 52.1/47.9 134/123 257 T 52.14007782 134 A 47.85992218 123 ConsensusfromContig426 245 202 SNP 1 G 2 G/A 63.8/36.2 166/94 260 G 63.84615385 166 A 36.15384615 94 ConsensusfromContig3270 132 46 SNP 1 A 1 G 67 175 261 G 67.04980843 175 ConsensusfromContig4114 206 189 SNP 1 A 1 G 77.4 202 261 G 77.39463602 202 ConsensusfromContig6116 134 123 SNP 1 A 1 G 100 264 264 G 100 264 ConsensusfromContig2102 146 146 SNP 1 A 2 A/G 64.2/35.8 170/95 265 A 64.1509434 170 G 35.8490566 95 ConsensusfromContig6044 108 108 SNP 1 G 1 A 82.3 219 266 A 82.33082707 219 ConsensusfromContig8088 275 248 SNP 1 C 1 T 100 266 266 T 100 266 ConsensusfromContig6658 99 91 SNP 1 C 1 T 100 268 268 T 100 268 ConsensusfromContig8597 66 63 SNP 1 A 1 G 100 273 273 G 100 273 ConsensusfromContig3623 76 76 SNP 1 A 2 A/G 54.2/45.8 149/126 275 A 54.18181818 149 G 45.81818182 126 ConsensusfromContig6336 117 117 SNP 1 C 2 C/T 62.8/37.2 174/103 277 C 62.81588448 174 T 37.18411552 103 ConsensusfromContig6639 64 55 SNP 1 G 2 G/A 53.2/46.8 148/130 278 G 53.23741007 148 A 46.76258993 130 ConsensusfromContig8969 225 225 SNP 1 G 2 G/A 51.6/48.4 144/135 279 G 51.61290323 144 A 48.38709677 135 ConsensusfromContig8145 525 506 SNP 1 C 1 T 98.2 275 280 T 98.21428571 275 ConsensusfromContig8145 527 508 SNP 1 A 1 C 99.3 279 281 C 99.28825623 279 ConsensusfromContig6539 241 210 SNP 1 C 2 C/T 62.1/37.9 175/107 282 C 62.05673759 175 T 37.94326241 107 ConsensusfromContig6634 20 20 SNP 1 T 1 C 92.9 263 283 C 92.93286219 263 ConsensusfromContig3285 95 63 SNP 1 A 1 G 95.8 273 285 G 95.78947368 273 ConsensusfromContig7013 266 266 SNP 1 A 1 C 99.7 286 287 C 99.65156794 286 ConsensusfromContig7875 122 73 SNP 1 T 2 T/G 53.0/46.3 152/133 287 T 52.96167247 152 G 46.34146341 133 ConsensusfromContig8609 305 303 SNP 1 G 2 G/A 55.0/45.0 159/130 289 G 55.01730104 159 A 44.98269896 130 ConsensusfromContig1569 167 154 SNP 1 T 2 A/T 54.8/45.2 159/131 290 A 54.82758621 159 T 45.17241379 131 ConsensusfromContig4791 119 119 SNP 1 C 1 T 99.7 289 290 T 99.65517241 289 ConsensusfromContig5734 343 335 SNP 1 G 2 G/A 59.5/40.5 173/118 291 G 59.45017182 173 A 40.54982818 118 ConsensusfromContig6639 49 40 SNP 1 A 2 A/G 53.4/46.6 157/137 294 A 53.40136054 157 G 46.59863946 137 ConsensusfromContig3442 203 203 SNP 1 A 2 G/A 58.6/41.4 173/122 295 G 58.6440678 173 A 41.3559322 122 ConsensusfromContig7875 143 94 SNP 1 G 2 G/A 55.3/44.7 163/132 295 G 55.25423729 163 A 44.74576271 132 ConsensusfromContig8597 314 311 SNP 1 C 2 C/G 61.1/38.9 181/115 296 C 61.14864865 181 G 38.85135135 115 ConsensusfromContig7989 245 208 SNP 1 C 2 T/C 63.3/36.7 188/109 297 T 63.2996633 188 C 36.7003367 109 ConsensusfromContig2438 500 119 SNP 1 C 1 T 67.4 203 301 T 67.44186047 203 ConsensusfromContig2655 200 167 SNP 1 G 1 C 66.9 202 302 C 66.88741722 202 ConsensusfromContig7501 380 347 SNP 1 C 2 C/T 64.2/35.8 194/108 302 C 64.2384106 194 T 35.7615894 108 ConsensusfromContig1569 172 159 SNP 1 A 1 C 79.9 242 303 C 79.8679868 242 ConsensusfromContig5705 254 51 SNP 1 T 2 C/T 57.4/42.6 175/130 305 C 57.37704918 175 T 42.62295082 130 ConsensusfromContig6060 214 214 SNP 1 G 2 G/T 59.2/40.8 181/125 306 G 59.1503268 181 T 40.8496732 125 ConsensusfromContig426 116 73 SNP 1 T 2 A/T 63.1/36.6 195/113 309 A 63.10679612 195 T 36.56957929 113 ConsensusfromContig1528 71 71 SNP 1 A 2 A/G 52.9/47.1 165/147 312 A 52.88461538 165 G 47.11538462 147 ConsensusfromContig7322 140 140 SNP 1 C 2 G/C 50.5/46.7 159/147 315 G 50.47619048 159 C 46.66666667 147 ConsensusfromContig8145 444 425 SNP 1 C 1 T 99.1 313 316 T 99.05063291 313 ConsensusfromContig5265 17 17 SNP 1 G 1 A 98.8 316 320 A 98.75 316 ConsensusfromContig2010 297 297 SNP 1 C 1 T 99.4 320 322 T 99.37888199 320 ConsensusfromContig8969 226 226 SNP 1 A 2 A/G 58.4/41.6 188/134 322 A 58.38509317 188 G 41.61490683 134 ConsensusfromContig3038 52 52 SNP 1 G 1 A 72.1 235 326 A 72.08588957 235 ConsensusfromContig8159 93 87 SNP 1 G 2 G/A 52.3/47.7 171/156 327 G 52.29357798 171 A 47.70642202 156 ConsensusfromContig1994 207 207 SNP 1 C 1 T 88.9 295 332 T 88.85542169 295 ConsensusfromContig8794 82 82 SNP 1 C 2 T/C 57.1/42.9 190/143 333 T 57.05705706 190 C 42.94294294 143 ConsensusfromContig5877 647 630 SNP 1 T 1 C 79.3 265 334 C 79.34131737 265 ConsensusfromContig8903 62 62 SNP 1 T 2 T/C 54.6/45.4 183/152 335 T 54.62686567 183 C 45.37313433 152 ConsensusfromContig6016 99 68 SNP 1 G 1 T 77.4 260 336 T 77.38095238 260 ConsensusfromContig8171 179 177 SNP 1 A 1 C 76.5 257 336 C 76.48809524 257 ConsensusfromContig8904 109 81 SNP 1 G 2 C/G 52.7/46.7 177/157 336 C 52.67857143 177 G 46.72619048 157 ConsensusfromContig7986 480 477 SNP 1 C 1 T 100 337 337 T 100 337 ConsensusfromContig2776 134 106 SNP 1 A 1 G 100 338 338 G 100 338 ConsensusfromContig6539 133 102 SNP 1 A 1 G 99.4 336 338 G 99.40828402 336 ConsensusfromContig5734 268 260 SNP 1 G 2 G/A 54.4/45.6 187/157 344 G 54.36046512 187 A 45.63953488 157 ConsensusfromContig8475 393 354 SNP 1 C 2 T/C 59.2/40.8 205/141 346 T 59.24855491 205 C 40.75144509 141 ConsensusfromContig6634 212 212 SNP 1 C 1 T 99.7 346 347 T 99.71181556 346 ConsensusfromContig6044 219 219 SNP 1 C 2 T/C 50.6/49.4 177/173 350 T 50.57142857 177 C 49.42857143 173 ConsensusfromContig5507 339 68 SNP 1 G 1 A 76.1 267 351 A 76.06837607 267 ConsensusfromContig8597 246 243 SNP 1 A 2 A/G 60.0/40.0 213/142 355 A 60 213 G 40 142 ConsensusfromContig3991 356 326 SNP 1 A 1 G 98.9 353 357 G 98.87955182 353 ConsensusfromContig3270 306 220 SNP 1 A 2 G/A 53.5/46.3 193/167 361 G 53.46260388 193 A 46.26038781 167 ConsensusfromContig660 70 41 SNP 1 C 1 T 94.8 343 362 T 94.75138122 343 ConsensusfromContig7048 11 5 SNP 1 T 1 C 100 363 363 C 100 363 ConsensusfromContig7395 41 27 SNP 1 G 1 A 99.2 363 366 A 99.18032787 363 ConsensusfromContig6060 199 199 SNP 1 C 2 C/T 64.4/35.6 237/131 368 C 64.40217391 237 T 35.59782609 131 ConsensusfromContig467 225 225 SNP 1 A 1 G 99.5 368 370 G 99.45945946 368 ConsensusfromContig8969 346 346 SNP 1 C 2 C/T 55.6/44.4 207/165 372 C 55.64516129 207 T 44.35483871 165 ConsensusfromContig426 194 151 SNP 1 C 1 A 98.1 366 373 A 98.1233244 366 ConsensusfromContig569 108 91 SNP 1 G 2 G/A 60.8/39.2 228/147 375 G 60.8 228 A 39.2 147 ConsensusfromContig6023 81 81 SNP 1 T 1 C 79.8 301 377 C 79.84084881 301 ConsensusfromContig9036 278 278 SNP 1 G 2 G/T 50.3/49.7 190/188 378 G 50.26455026 190 T 49.73544974 188 ConsensusfromContig3219 308 292 SNP 1 C 1 T 95 361 380 T 95 361 ConsensusfromContig6539 92 61 SNP 1 A 2 A/G 51.0/49.0 195/187 382 A 51.04712042 195 G 48.95287958 187 ConsensusfromContig6539 121 90 SNP 1 C 2 C/T 54.5/45.5 208/174 382 C 54.45026178 208 T 45.54973822 174 ConsensusfromContig8837 297 297 SNP 1 C 1 T 98.2 375 382 T 98.16753927 375 ConsensusfromContig2678 124 124 SNP 1 C 2 A/C 58.6/38.8 225/149 384 A 58.59375 225 C 38.80208333 149 ConsensusfromContig2655 272 239 SNP 1 A 1 G 69.9 269 385 G 69.87012987 269 ConsensusfromContig5253 176 176 SNP 1 A 1 C 81.9 317 387 C 81.9121447 317 ConsensusfromContig716 374 342 SNP 1 C 1 T 73.7 288 391 T 73.657289 288 ConsensusfromContig4152 343 301 SNP 1 C 1 T 98.2 386 393 T 98.21882952 386 ConsensusfromContig7256 288 248 SNP 1 G 1 A 93.4 368 394 A 93.40101523 368 ConsensusfromContig3578 458 445 SNP 1 A 1 C 71.9 284 395 C 71.89873418 284 ConsensusfromContig6634 35 35 SNP 1 A 2 G/A 60.5/39.5 239/156 395 G 60.50632911 239 A 39.49367089 156 ConsensusfromContig147 192 192 SNP 1 T 2 C/T 52.8/47.2 209/187 396 C 52.77777778 209 T 47.22222222 187 ConsensusfromContig1647 198 197 SNP 1 T 1 G 70.7 280 396 G 70.70707071 280 ConsensusfromContig3270 198 112 SNP 1 G 2 A/G 51.5/48.5 204/192 396 A 51.51515152 204 G 48.48484848 192 ConsensusfromContig8877 194 190 SNP 1 A 2 A/G 60.7/39.3 242/157 399 A 60.65162907 242 G 39.34837093 157 ConsensusfromContig6044 117 117 SNP 1 G 2 G/T 52.9/46.9 213/189 403 G 52.85359801 213 T 46.89826303 189 ConsensusfromContig8904 95 67 SNP 1 A 1 G 85.1 344 404 G 85.14851485 344 ConsensusfromContig8724 241 240 SNP 1 A 2 A/G 64.6/35.4 263/144 407 A 64.61916462 263 G 35.38083538 144 ConsensusfromContig4152 441 399 SNP 1 C 2 T/C 60.0/40.0 247/165 412 T 59.95145631 247 C 40.04854369 165 ConsensusfromContig1637 229 229 SNP 1 C 1 T 81 336 415 T 80.96385542 336 ConsensusfromContig1528 191 191 SNP 1 A 1 C 77.7 327 421 C 77.67220903 327 ConsensusfromContig3219 332 316 SNP 1 C 2 C/T 60.2/39.8 256/169 425 C 60.23529412 256 T 39.76470588 169 ConsensusfromContig2776 303 275 SNP 1 C 2 C/T 52.4/47.6 226/205 431 C 52.4361949 226 T 47.5638051 205 ConsensusfromContig3270 459 373 SNP 1 T 2 T/C 57.0/43.0 248/187 435 T 57.01149425 248 C 42.98850575 187 ConsensusfromContig6023 93 93 SNP 1 A 1 G 72.3 316 437 G 72.31121281 316 ConsensusfromContig5998 44 40 SNP 1 T 2 C/T 59.7/40.3 270/182 452 C 59.73451327 270 T 40.26548673 182 ConsensusfromContig604 62 31 SNP 1 T 1 C 100 455 455 C 100 455 ConsensusfromContig3277 190 172 SNP 1 C 1 T 85.8 393 458 T 85.80786026 393 ConsensusfromContig5507 384 113 SNP 1 T 2 T/G 57.9/41.5 268/192 463 T 57.88336933 268 G 41.46868251 192 ConsensusfromContig6634 47 47 SNP 1 T 2 T/C 57.8/42.2 274/200 474 T 57.80590717 274 C 42.19409283 200 ConsensusfromContig8597 405 402 SNP 1 A 2 A/G 55.7/44.3 265/211 476 A 55.67226891 265 G 44.32773109 211 ConsensusfromContig4019 84 84 SNP 1 C 1 T 93.1 445 478 T 93.09623431 445 ConsensusfromContig7810 84 72 SNP 1 G 2 G/T 53.3/46.7 255/223 478 G 53.34728033 255 T 46.65271967 223 ConsensusfromContig4019 120 120 SNP 1 C 1 T 99.8 478 479 T 99.79123173 478 ConsensusfromContig5998 131 127 SNP 1 T 2 C/T 62.0/38.0 297/182 479 C 62.00417537 297 T 37.99582463 182 ConsensusfromContig7937 468 453 SNP 1 A 2 A/G 62.4/37.6 301/181 482 A 62.44813278 301 G 37.55186722 181 ConsensusfromContig1637 223 223 SNP 1 A 1 C 85.7 418 488 C 85.6557377 418 ConsensusfromContig1594 231 231 SNP 1 G 2 A/G 61.1/38.9 300/191 491 A 61.09979633 300 G 38.90020367 191 ConsensusfromContig3270 207 121 SNP 1 T 2 A/T 54.9/44.9 271/222 494 A 54.8582996 271 T 44.93927126 222 ConsensusfromContig6502 190 174 SNP 1 A 2 A/G 62.2/37.8 309/188 497 A 62.17303823 309 G 37.82696177 188 ConsensusfromContig7318 313 299 SNP 1 G 2 G/A 63.2/36.8 314/183 497 G 63.17907445 314 A 36.82092555 183 ConsensusfromContig2776 300 272 SNP 1 C 2 C/T 63.4/36.6 317/183 500 C 63.4 317 T 36.6 183 ConsensusfromContig3403 20 20 SNP 1 T 2 A/T 51.8/48.2 260/242 502 A 51.79282869 260 T 48.20717131 242 ConsensusfromContig426 203 160 SNP 1 C 1 G 99 503 508 G 99.01574803 503 ConsensusfromContig6539 371 340 SNP 1 C 2 C/A 54.5/45.5 282/235 517 C 54.54545455 282 A 45.45454545 235 ConsensusfromContig3219 335 319 SNP 1 A 1 T 57.7 300 520 T 57.69230769 300 ConsensusfromContig7318 56 50 SNP 1 T 2 T/G 58.9/40.7 308/213 523 T 58.89101338 308 G 40.72657744 213 ConsensusfromContig2524 78 49 SNP 1 A 1 G 100 525 525 G 100 525 ConsensusfromContig460 183 167 SNP 1 G 1 T 84.7 449 530 T 84.71698113 449 ConsensusfromContig7185 215 145 SNP 1 T 2 C/T 61.6/38.4 327/204 531 C 61.5819209 327 T 38.4180791 204 ConsensusfromContig6502 118 102 SNP 1 G 2 G/A 59.5/40.5 317/216 533 G 59.47467167 317 A 40.52532833 216 ConsensusfromContig6689 229 209 SNP 1 A 1 T 99.6 533 535 T 99.62616822 533 ConsensusfromContig3295 41 41 SNP 1 C 2 T/C 62.8/37.2 340/201 541 T 62.84658041 340 C 37.15341959 201 ConsensusfromContig3727 314 314 SNP 1 G 1 C 75.8 410 541 C 75.78558226 410 ConsensusfromContig2177 25 23 SNP 1 C 1 G 98.7 543 550 G 98.72727273 543 ConsensusfromContig5734 232 224 SNP 1 G 2 A/G 56.5/43.3 313/240 554 A 56.49819495 313 G 43.32129964 240 ConsensusfromContig2655 220 187 SNP 1 C 1 T 100 562 562 T 100 562 ConsensusfromContig2118 68 68 SNP 1 G 2 G/C 56.4/43.6 322/249 571 G 56.39229422 322 C 43.60770578 249 ConsensusfromContig6453 56 56 SNP 1 G 2 G/A 55.9/44.1 322/254 576 G 55.90277778 322 A 44.09722222 254 ConsensusfromContig3727 321 321 SNP 1 T 2 C/T 63.8/36.2 368/209 577 C 63.77816291 368 T 36.22183709 209 ConsensusfromContig1348 286 245 SNP 1 C 2 T/C 55.9/44.1 324/256 580 T 55.86206897 324 C 44.13793103 256 ConsensusfromContig2655 257 224 SNP 1 C 2 T/C 60.2/39.8 351/232 583 T 60.2058319 351 C 39.7941681 232 ConsensusfromContig6689 259 239 SNP 1 A 1 G 99.7 581 583 G 99.65694683 581 ConsensusfromContig8481 173 168 SNP 1 G 2 A/G 59.5/40.3 359/243 603 A 59.53565506 359 G 40.29850746 243 ConsensusfromContig1623 241 241 SNP 1 A 1 G 79.3 480 605 G 79.33884298 480 ConsensusfromContig8152 488 432 SNP 1 G 2 G/A 63.2/36.6 385/223 609 G 63.2183908 385 A 36.61740558 223 ConsensusfromContig3270 345 259 SNP 1 C 2 C/T 63.6/36.4 391/224 615 C 63.57723577 391 T 36.42276423 224 ConsensusfromContig3219 356 340 SNP 1 G 1 A 90.8 562 619 A 90.79159935 562 ConsensusfromContig3214 215 215 SNP 1 T 2 T/C 63.2/36.6 392/227 620 T 63.22580645 392 C 36.61290323 227 ConsensusfromContig3214 279 279 SNP 1 G 2 G/A 61.0/39.0 384/245 629 G 61.04928458 384 A 38.95071542 245 ConsensusfromContig2252 248 220 SNP 1 T 1 C 100 635 635 C 100 635 ConsensusfromContig5265 242 242 SNP 1 C 2 T/C 60.9/39.1 391/251 642 T 60.90342679 391 C 39.09657321 251 ConsensusfromContig6453 32 32 SNP 1 A 2 A/G 63.5/36.5 410/236 646 A 63.46749226 410 G 36.53250774 236 ConsensusfromContig9340 104 104 SNP 1 C 2 C/T 64.9/35.1 419/227 646 C 64.86068111 419 T 35.13931889 227 ConsensusfromContig8903 182 182 SNP 1 A 2 A/G 52.6/47.4 342/308 650 A 52.61538462 342 G 47.38461538 308 ConsensusfromContig2655 149 116 SNP 1 T 2 T/C 53.9/46.1 353/302 655 T 53.89312977 353 C 46.10687023 302 ConsensusfromContig3403 21 21 SNP 1 A 2 A/T 62.6/37.4 415/248 663 A 62.59426848 415 T 37.40573152 248 ConsensusfromContig2546 168 151 SNP 1 G 1 A 66.5 444 668 A 66.46706587 444 ConsensusfromContig8784 180 139 SNP 1 G 2 G/A 57.5/42.5 385/285 670 G 57.46268657 385 A 42.53731343 285 ConsensusfromContig8412 68 59 SNP 1 G 2 G/T 59.4/40.6 399/273 672 G 59.375 399 T 40.625 273 ConsensusfromContig926 307 277 SNP 1 C 1 A 72.5 499 688 A 72.52906977 499 ConsensusfromContig1528 273 273 SNP 1 A 2 A/G 53.7/46.3 372/321 693 A 53.67965368 372 G 46.32034632 321 ConsensusfromContig8597 198 195 SNP 1 A 2 A/G 58.2/41.8 405/291 696 A 58.18965517 405 G 41.81034483 291 ConsensusfromContig2524 51 22 SNP 1 A 2 A/C 61.3/38.6 427/269 697 A 61.2625538 427 C 38.59397418 269 ConsensusfromContig3880 381 237 SNP 1 C 2 A/C 51.0/49.0 359/345 704 A 50.99431818 359 C 49.00568182 345 ConsensusfromContig3277 301 262 SNP 1 C 2 C/T 64.3/35.7 464/258 722 C 64.26592798 464 T 35.73407202 258 ConsensusfromContig5265 227 227 SNP 1 G 2 A/G 52.9/47.1 390/347 737 A 52.91723202 390 G 47.08276798 347 ConsensusfromContig1693 145 145 SNP 1 T 2 T/G 56.0/44.0 415/326 741 T 56.00539811 415 G 43.99460189 326 ConsensusfromContig1650 711 611 SNP 1 G 1 A 77.3 575 744 A 77.28494624 575 ConsensusfromContig3741 118 87 SNP 1 C 2 T/C 63.6/36.4 474/271 745 T 63.62416107 474 C 36.37583893 271 ConsensusfromContig8597 213 210 SNP 1 C 2 C/T 52.8/47.2 394/352 746 C 52.8150134 394 T 47.1849866 352 ConsensusfromContig6037 106 90 SNP 1 T 2 G/T 57.6/42.2 431/316 748 G 57.62032086 431 T 42.2459893 316 ConsensusfromContig8412 74 65 SNP 1 C 2 C/A 62.8/37.2 471/279 750 C 62.8 471 A 37.2 279 ConsensusfromContig5932 245 245 SNP 1 T 2 T/C 61.8/38.2 464/287 751 T 61.78428762 464 C 38.21571238 287 ConsensusfromContig7548 248 223 SNP 1 C 1 T 68.8 519 754 T 68.83289125 519 ConsensusfromContig8206 387 385 SNP 1 A 2 G/A 57.2/42.8 440/329 769 G 57.21716515 440 A 42.78283485 329 ConsensusfromContig8837 7 7 SNP 1 T 2 G/T 62.0/38.0 477/292 769 G 62.02860858 477 T 37.97139142 292 ConsensusfromContig1650 568 468 SNP 1 C 1 A 100 770 770 A 100 770 ConsensusfromContig3234 94 78 SNP 1 C 2 C/T 56.1/43.9 433/339 772 C 56.0880829 433 T 43.9119171 339 ConsensusfromContig3880 376 232 SNP 1 T 2 C/T 50.1/49.9 390/389 779 C 50.06418485 390 T 49.93581515 389 ConsensusfromContig1693 202 202 SNP 1 T 2 T/G 54.6/45.3 429/356 786 T 54.58015267 429 G 45.29262087 356 ConsensusfromContig4114 331 314 SNP 1 A 2 C/A 61.4/38.5 485/304 790 C 61.39240506 485 A 38.48101266 304 ConsensusfromContig6360 100 73 SNP 1 G 1 T 77.1 615 798 T 77.06766917 615 ConsensusfromContig7318 349 335 SNP 1 G 2 A/G 55.3/44.7 446/360 806 A 55.33498759 446 G 44.66501241 360 ConsensusfromContig8969 124 124 SNP 1 T 2 T/C 64.4/35.6 522/288 810 T 64.44444444 522 C 35.55555556 288 ConsensusfromContig1650 566 466 SNP 1 A 1 C 99.9 821 822 C 99.8783455 821 ConsensusfromContig6360 93 66 SNP 1 T 1 C 77.6 638 822 C 77.61557178 638 ConsensusfromContig2546 171 154 SNP 1 C 2 T/C 57.8/42.2 491/359 850 T 57.76470588 491 C 42.23529412 359 ConsensusfromContig3228 68 68 SNP 1 T 2 C/T 53.6/46.4 460/398 858 C 53.61305361 460 T 46.38694639 398 ConsensusfromContig9036 71 71 SNP 1 G 2 A/G 60.9/39.0 531/340 872 A 60.89449541 531 G 38.99082569 340 ConsensusfromContig2678 112 112 SNP 1 T 2 T/C 64.3/35.7 565/314 879 T 64.27758817 565 C 35.72241183 314 ConsensusfromContig8877 221 217 SNP 1 G 1 T 81.8 730 892 T 81.83856502 730 ConsensusfromContig4152 277 235 SNP 1 C 1 G 78.4 717 915 G 78.36065574 717 ConsensusfromContig1650 603 503 SNP 1 G 2 A/G 58.7/41.3 553/389 942 A 58.70488323 553 G 41.29511677 389 ConsensusfromContig2624 257 227 SNP 1 C 1 T 99.7 941 944 T 99.68220339 941 ConsensusfromContig8904 258 230 SNP 1 G 1 A 70.3 670 953 A 70.3043022 670 ConsensusfromContig6278 201 201 SNP 1 A 1 G 85.4 837 980 G 85.40816327 837 ConsensusfromContig3214 189 189 SNP 1 T 2 T/C 56.7/43.3 561/429 990 T 56.66666667 561 C 43.33333333 429 ConsensusfromContig4152 58 16 SNP 1 C 1 T 74.4 740 995 T 74.3718593 740 ConsensusfromContig1623 446 446 SNP 1 G 1 T 100 996 996 T 100 996 ConsensusfromContig6278 150 150 SNP 1 G 2 G/C 60.8/39.1 607/391 999 G 60.76076076 607 C 39.13913914 391